Pairwise Alignments

Query, 717 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 599 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  131 bits (330), Expect = 8e-35
 Identities = 81/280 (28%), Positives = 135/280 (48%), Gaps = 39/280 (13%)

Query: 421 VFIELGLRVWGVSMISFAEGDGHDISLRLLGLAGTLIVAWLVWILADTAVHHALVRSRRG 480
           + IE   + W  S +   EGD     LR+                        +VR+ +G
Sbjct: 335 LLIERSAKAWERSALLAVEGDRRRSELRVT----------------------TIVRASKG 372

Query: 481 LANARAQTMMPLIRNVMFVVIFIIAVIVALAN-MGMNVTPLLAGAGVIGLAIGFGAQSLV 539
           LA A                +   AV++A+ N +G+  + +LAG+ ++GLAI FG+QSLV
Sbjct: 373 LATA----------------LVAFAVLLAVLNTLGLPASSVLAGSAILGLAISFGSQSLV 416

Query: 540 ADLITGLFIIIEDSLAIDDYVDVGGHLGTVEGLTIRTVRLRDIDGIVHTIPFSEIKSIKN 599
            DL+ G  I++ED  A+ D ++V G  G VE L +R  ++RD +G + TIP S I  ++N
Sbjct: 417 KDLVNGCLILVEDQFAVGDVINVNGQGGLVETLNLRVTQIRDAEGGLITIPNSTISQVRN 476

Query: 600 YSREFGYAIFRVAIPHSMNIDQAISLVREVGQKLRNDPLMRRNIWSPLELQGVESFESGS 659
            SR +    F + +    ++DQ ++ +  V + L  DP  +  I  P E+ GV++     
Sbjct: 477 LSRTWSRVDFNLEVGWENDVDQVLACLTHVVENLYADPEWQALICEPPEVLGVDAIAHQG 536

Query: 660 AILRARFKTAPIKQWEVSRAFNLALKRQLDEAGLDLATPR 699
            +++   KT P+ QW+V R     +   L   G+ +  P+
Sbjct: 537 VLIKIWIKTQPLMQWKVGRELRRRVHHALQAEGISIGRPQ 576



 Score = 26.9 bits (58), Expect = 0.003
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 110 RWAAEIEQAQAELAELVVPVHQWPAILFGFAAVIAVWSVLAYAFNWVGHRVRLR 163
           +W ++I QA+ E +  ++    W A L   A ++ + ++ +  F WV   +  R
Sbjct: 171 QWRSQI-QAEIERSRQILSPRNWLATLGAVARILCLAAIASLLFWWVQRELNYR 223