Pairwise Alignments

Query, 306 a.a., Recombination-associated protein RdgC from Pseudomonas putida KT2440

Subject, 304 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  241 bits (615), Expect = 2e-68
 Identities = 133/304 (43%), Positives = 188/304 (61%), Gaps = 1/304 (0%)

Query: 1   MWFKNLLTYRLTQEVPFEPEALEAALASKPARPCASQELTTYGFVAPFGKGEDAPLVHVS 60
           MWFKNL  YR  +    E EALE ALA     PC SQ+++ +GF    GK + + LVH +
Sbjct: 1   MWFKNLTLYRFNKPFSIETEALETALADFTFSPCGSQDVSKFGFSNALGK-KGSTLVHSA 59

Query: 61  GEYLLIAARKEERILPSSVVNDAVKEKVEEIETEQMRKVYKKERDQIKDEIIQAFLPRAF 120
               LI   KEE+ILP+ V+ ++++EKV +IE E+ RK+ KKE+D +KDEII + LPRAF
Sbjct: 60  NNRHLICVTKEEKILPAQVIKESLEEKVAQIEDEENRKLAKKEKDALKDEIITSLLPRAF 119

Query: 121 IRRSMIFAAIAPRLGVILVNSASAKRAEDLLSTLREVMGSLPVRPATVKIAPVATMTDWV 180
            RRS   A I P L +ILV+S+SA +AE+LL+ LR+ +GSLPV P + K    + +T+W+
Sbjct: 120 SRRSQTRALILPELEMILVDSSSATKAEELLALLRKALGSLPVIPLSFKAPIESQLTEWL 179

Query: 181 KSQQAAEGFYVLDECELRDTAEDGGIVRCKRQDLTGEEIQLHLSTGKVVTQLALAWQDKL 240
           K+  A   F + DE EL+  A++GGIVR K+QDL  +E+  HL TGK V +LAL +   +
Sbjct: 180 KNGSAPLPFEMQDEAELKSAADEGGIVRFKQQDLKEDEVLAHLETGKEVHKLALHFGQSI 239

Query: 241 SFILDDKMVIKRLKFEELLQEQAEQDGGDEAAQQFDASFQLMMMTFAEFLPVLFEALGGE 300
           + +L     +KRLKF E  +   ++ G ++   + DA F LM       +  L  ALGG 
Sbjct: 240 ALLLQSDASVKRLKFSEEFRAGNDELGNEDPMARLDADFALMGSELVALMHALVSALGGI 299

Query: 301 EIPQ 304
           E  Q
Sbjct: 300 EETQ 303