Pairwise Alignments

Query, 1159 a.a., putative Sodium-solute symporter/sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 1048 bits (2711), Expect = 0.0
 Identities = 571/1157 (49%), Positives = 789/1157 (68%), Gaps = 28/1157 (2%)

Query: 7    LIAVVALAYMAIMFAIAFYGDRRSTPLPPKLRAWVYSLSLAVYCTSWTFFGAVGQAAEQL 66
            L+  V+LAY+ ++F IA+YGDR++  L    R W+YSLS+AVYCTSWTF+G VGQA+   
Sbjct: 5    LVIPVSLAYLGVLFLIAWYGDRQTRWLA-NWRPWIYSLSIAVYCTSWTFYGTVGQASVNP 63

Query: 67   WAFLPIYLGPVLLLIFAPWVLQKMVLISKQQNITSIADFIAARYGKSQTLAVVVALICLV 126
            W+FLPIY+ P+L+ +F   VL +++LI+K+++ITS+ADFIAARYGKSQ LAV V +I ++
Sbjct: 64   WSFLPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAVTVIAVL 123

Query: 127  GVLPYIALQLKGIVLGVNLLIGANADATGTRVQDTALVISLVLALFAIVFGTRSLDVTEH 186
            G+LPYIALQL+GI +G+N++        G +    +  + L LALF ++FGTR +D TEH
Sbjct: 124  GILPYIALQLRGITMGLNIVAPDLMTVYGYQESHVSWFVVLALALFTMLFGTRHIDNTEH 183

Query: 187  HRGMVLAIAFESLIKLLAFLAVGIFIVFNLF--DGFDDLFSQARQSIHLQDYWKETINWP 244
            HRGM++AIAFES++KL+AFL VG+FI +  +  DG +        +I    Y  +  NWP
Sbjct: 184  HRGMMMAIAFESIVKLVAFLCVGVFIAYLAWRTDGLE------LSTIAASTY--QAPNWP 235

Query: 245  SMVVQTAVAMMAIICLPRQFHVTVVENIEPQDLRLARWVFPMYLALAALFVVPIALAGQM 304
            ++++ T + M+AI+CLPRQFH  VVEN  PQDL  ARW+FP+YL L +LFV+PIA  GQ 
Sbjct: 236  TLLIHTLLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMSLFVLPIAWTGQG 295

Query: 305  LLPGTVISDSFVISLPLAEAHPSLALLAFIGGASAATGMVIVEAVALSTMVSNDMLLPWL 364
            LLP T   D+FVISLP+      +ALLAF+GG SAA+GMVIV  +AL+ MVSND+++P L
Sbjct: 296  LLPNTS-PDTFVISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIALAIMVSNDLVMPLL 354

Query: 365  LRRNN-AERPFEAFRHWMLSVRRVTIVVILLLAYVSYRLLGSTASLATIGQIAFAAVTQL 423
            LRR   ++R    F   ++ +RR  I+++L  A+  Y +L S  SL+ IG ++F+A+TQ 
Sbjct: 355  LRRMRLSQRTHRHFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSAIGFLSFSAITQF 414

Query: 424  TPAMLGALYWKQANRRGVFAGLAAGIFLWFYTLVLPIAAHSLGWSLQLFPGLAWLHGNP- 482
             PA+ G +YW++ NR+GV+ GLA G  LW  TL+      +   S  +   L W+   P 
Sbjct: 415  APAIFGGMYWREGNRKGVYVGLAVGFTLWLITLMSATDMLAGDASNNV---LLWVITPPD 471

Query: 483  --LNLPISPLTQGVVLSLAGNFTLFAWVSVLSRTRVSEHWQAGRFIGQQTSARPSSKPLL 540
              + L +     G++LS+  N   +  VS+++R  +SE  QA  F+G       +     
Sbjct: 472  WLVALGLKSADWGMLLSVTLNTLCYIGVSLVTRASLSERLQAAAFVGTPLPENENMSLYQ 531

Query: 541  A-VQIDDLLTLASRFVGEERARQSFIRFAYRQGKGFNPNQNADGDWIEHTERLLAGVLGT 599
            + V + +L  LASRFVG  R R +F ++  +Q +   PNQ A    I HTER+LAGV G 
Sbjct: 532  SRVTVGELEMLASRFVGRTRVRNAFAQYWSQQRETLLPNQQASSALIRHTERVLAGVFGA 591

Query: 600  SSTRAVVKAAIEGRDMQLEDVVRIADEASEVLQFNRALLQGAIENINQGISVVDQNLHLV 659
            SS + V+ +A++GR MQLE+V  I DEASE+  F+R LLQGAIE+I QGI+VVD+ L LV
Sbjct: 592  SSAKLVLTSALQGRKMQLEEVATIVDEASELYDFSRGLLQGAIEHIGQGIAVVDKQLRLV 651

Query: 660  AWNRRYLELFNYPDGLISVGRPIADIIRYNAERGLCGPGEAQVHVARRLHWMRQGRAHSS 719
            AWN+RYLELF +P GLI VGRPIAD+IR+NA++GLCGPG+ + HV RR++ + QG +H+S
Sbjct: 652  AWNQRYLELFEFPPGLIQVGRPIADVIRHNAQQGLCGPGDPEDHVRRRVYHLEQGTSHTS 711

Query: 720  ERLFPNGRVIELIGNPMPGGGFVMSFTDITPFREAEQALRDANERLEQRVAERTHELSQL 779
             R+  +GRVIE+ GNPMPGGGFVMSFTDIT FREAEQ+L+ ANE LE+RV +RT EL +L
Sbjct: 712  SRVRADGRVIEVQGNPMPGGGFVMSFTDITVFREAEQSLKMANETLEERVLQRTLELEKL 771

Query: 780  NQALSEAKSQAEAVSNSKTRFLAAVSHDLMQPLNAARLFSAALSQQAEGMNEEARQLVQH 839
            N+ L  A  ++E  S SK+RFLAAVSHDLMQPLNAARLF+++LS+ A+    E ++L  H
Sbjct: 772  NKQLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEVAK--EAEVQKLAHH 829

Query: 840  MDSSLRSAEELISDLLDISRLENGKITPDAKPFALNELFDTLGAEFKLLAAEKGLEFRLR 899
            ++S+L +AE+LISDLLDISRLE+GKI      FA+ ++   L AEF  LAA++G++F L 
Sbjct: 830  IESALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSALAAKQGVQFSLV 889

Query: 900  GSRLRVDSDMKLLRRVLQNFLTNALRYG-KSPILLGARRQGE-RLWLEVWDRGPGIADDK 957
             S L V SD KLLRRV+QNFLTNA RY     ++LG RR    ++ ++VWD G GI  DK
Sbjct: 890  PSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVATGQVRIDVWDNGIGIEQDK 949

Query: 958  LQVIFQEFKRLDSHQTRAEKGLGLGLAIADGLCRVLGHPLEVRSWPGKGTVFRVSVPIAR 1017
             Q IF+EF R    Q R+++GLGLGLAI+ G+  VLGH + +RSWPG+G+VF +++  A+
Sbjct: 950  QQEIFEEFNR--GGQVRSDQGLGLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLDRAQ 1007

Query: 1018 --QAAAAPSTPVEQQGGQPLAGLQVLCVDNEDSILIGMNSLLSRWGCQVWTARNQAECEA 1075
               ++   +  +  + G  L  L+VLCVDNE  IL+GM  LL RWGC+V TA +      
Sbjct: 1008 PMPSSLTQTVAMVNEKGSELQHLRVLCVDNEPDILVGMRDLLERWGCEVKTATDIHGSLK 1067

Query: 1076 LLAKGMRPHLALVDYHLDDGETGTGLMGWLRARLGEPVPGVVISADGSKETIALVHASGL 1135
             L     P + L DY LD+G TG  ++   R RLG+   GV+ISAD + + +  + +SG 
Sbjct: 1068 ALEGQWIPDVILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVIISADRNPDILDGIESSGF 1127

Query: 1136 DYLAKPVKPAALRALLN 1152
             ++AKP+KP  LRALLN
Sbjct: 1128 RFMAKPIKPLKLRALLN 1144