Pairwise Alignments

Query, 1159 a.a., putative Sodium-solute symporter/sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 817 a.a., PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  244 bits (623), Expect = 2e-68
 Identities = 191/597 (31%), Positives = 286/597 (47%), Gaps = 48/597 (8%)

Query: 561  RQSFIRFAYRQGKGFNPNQNADGDWIEHTERLLAGVLGTSSTRAVVKAAIEGRDMQLEDV 620
            RQ+ +R     GK       +   W EHT   +    G    R V  AA   RD+  E  
Sbjct: 244  RQTRVREVIDGGKAVRFVDRSGDRWREHTFSPIPDGEG----RTVAIAACS-RDVTAEK- 297

Query: 621  VRIADEASEVLQFNRALLQGAIENINQGISVVDQNLHLVAWNRRYLELFNYPDGLISVGR 680
             R+  E     QF R +     +N+   +  VD+       NRR  +          +G+
Sbjct: 298  -RVHQELCRREQFIRLIT----DNLPGVVFYVDEADTFKFVNRRVTDW---------LGK 343

Query: 681  PIADIIRYNAERGLCGPGEAQVHVARRLHWMRQGRAHSSERLFPNGRVIELIGNPMPG-- 738
            P  D++      G+           R+     +     SE + P+G         +P   
Sbjct: 344  PPTDLLGRPFREGVDPLLNEATLAGRKAALAGERVDFDSEFVDPDGHTRRFQATFIPHLE 403

Query: 739  GGFVMSFTDITPFREAEQALRDANERLEQRVAERTHELSQLNQALSEAKSQAEAVSNSKT 798
            GG V+ +  +         L D  +R+E   A R            +A ++AEA S SK+
Sbjct: 404  GGEVLGYVGL---------LLDTTKRVEVEAAVR------------DALARAEAASTSKS 442

Query: 799  RFLAAVSHDLMQPLNAARLFSAALSQQAEGMNEEARQLVQHMDSSLRSAEELISDLLDIS 858
            RFLAA SHDL QP+ A  ++   L++Q       A +LVQ +  S+ +  +L+  LLD+S
Sbjct: 443  RFLAAASHDLRQPMQALNIYVGLLTRQVREQ-PRAYELVQRVGQSVNALGDLLDSLLDVS 501

Query: 859  RLENGKITPDAKPFALNELFDTLGAEFKLLAAEKGLEFRLRGSRLRVDSDMKLLRRVLQN 918
            +L+ G +T   +PFA+N + + +  E + L   KGL FR+  S L   SD  L+ R+L+N
Sbjct: 502  KLDAGIVTAAPQPFAVNNILERMDTEMRPLFEAKGLRFRVVKSALMACSDDTLVERILRN 561

Query: 919  FLTNALRYGKSP-ILLGARRQGERLWLEVWDRGPGIADDKLQVIFQEFKRLDSHQTRAEK 977
             +TNA RY +S  ++LG RR+G  +  +VWD G GI  D+L +IF+EF ++ +      +
Sbjct: 562  LVTNAYRYTQSGGVVLGCRRRGGTVVFQVWDSGIGIPADRLDLIFEEFYQVGNQGRDRAQ 621

Query: 978  GLGLGLAIADGLCRVLGHPLEVRSWPGKGTVFRVSVPIARQAAAAPSTPVEQQGGQPLA- 1036
            GLGLGLAI   L ++LGHP+ VRS  G+GT+F V++P A       +       G P   
Sbjct: 622  GLGLGLAIVRRLSQLLGHPVAVRSEVGRGTMFEVALPQASPEEMEAAVTSWTATGLPAIR 681

Query: 1037 -GLQVLCVDNEDSILIGMNSLLSRWGCQVWTARNQAEC-EALLAKGMRPHLALVDYHLDD 1094
             G   + +D++ ++L GM  LL  WG  V  A++  E  EAL      P + + DY L  
Sbjct: 682  DGTLAVVIDDDSAVLDGMALLLEDWGFDVVAAQDMLEAFEALRGSPKAPAVIIADYRLQA 741

Query: 1095 GETGTGLMGWLRARLGEPVPGVVISADGSKETIALVHASGLDYLAKPVKPAALRALL 1151
            G TG   +  LR   G  +PGV+++ D S E +  V ASG   L KPV+   LRA L
Sbjct: 742  GGTGVAAVQSLRQAFGVTIPGVIVTGDTSPERLREVTASGFRLLHKPVRTFDLRAAL 798