Pairwise Alignments

Query, 421 a.a., putative Long-chain fatty acid transporter from Pseudomonas putida KT2440

Subject, 428 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Shewanella sp. ANA-3

 Score =  162 bits (411), Expect = 1e-44
 Identities = 124/433 (28%), Positives = 197/433 (45%), Gaps = 28/433 (6%)

Query: 7   KTSLGVAVALASSQLFASGFALNEQSISSMGTGFAGRSSSAEDASTVFGNPAGMSRLKRE 66
           KT L VAVALASSQ FASGF LN QS + MG  FAG +  A++AS +  NPA M+   ++
Sbjct: 6   KTLLAVAVALASSQTFASGFQLNSQSATGMGRAFAGDAVIADNASVLSRNPAAMALFDKD 65

Query: 67  QFTVGGAAVIAKTDI-----SGPGSNLGGETDGDMVPVVGVPMGYYVKPIDDHWSVGFGI 121
             ++G        D+      G   +LG   D     V  +P  +Y+ PIDD ++VGF  
Sbjct: 66  AISLGLTYADITVDVKDVNFGGGAYDLGSIDDAGSSKV--IPNIFYIHPIDDKFAVGFAA 123

Query: 122 YVPFGLVTDYGS----DDAARY-WGKKSHVQVVTFQPTVSYAFNDKVSIGFGPTINRIEG 176
           +  FG  TD  S      AA +    ++ V  V F  +VSY  ND  SIG G      EG
Sbjct: 124 FSNFGTGTDASSLSKNKPAAPFDLLGETEVTTVNFNASVSYRINDMFSIGAGLDAVYGEG 183

Query: 177 ELGSSLINPFTPGRNDGEVKIKGDDTAVGYNIGILVQATDRTRVGLTYHSMVDYELEGK- 235
            L  ++    TP      V +  D  A G  +G  V+     R G++Y       +EG  
Sbjct: 184 RLTRNM--GTTP-----LVDVDADGWAFGGIVGATVELNKDNRFGISYRFSPTVNVEGDI 236

Query: 236 ---TRVSTPLIGPFNGNKFDASLKIKTPESVDLSVTHELDDQWTLYAGSTWTRWSRLENI 292
              +  + P +G         SL +   +   ++  H++  ++ L+  +  T+W   + I
Sbjct: 237 NTVSMTTIPGVGAVPVTTSFDSLDVPLADIFQVAGFHQITPKFALHYTAQHTQWGNFDQI 296

Query: 293 TVQNDVPAPLAGSAFQTI----TEEQNWHDTWAHAIGASYKVNKEWVLRTGFTVDQSPTN 348
           T ++      A    Q +     +E  W D+W  ++G +Y +N+++ +R G+  DQ   +
Sbjct: 297 TAKDGTATIAAVGVTQPVGDVALKEYQWKDSWLFSVGGTYTINEQFTVRAGYMHDQGVVD 356

Query: 349 NHDRSPRIPTGDRRIFSLGAGWSPNDDMTIDVAYSYLWEEDTKVNQVSATKGSYQAKYEN 408
               S   P  DR  ++ G  +  N   T+D+  +Y+  E+  + + SA  G   A  E+
Sbjct: 357 EIS-SISFPDSDRNWYTAGMSYHINPQNTVDLGIAYIKGEEVHLIENSAITGPVNAVTES 415

Query: 409 SAHGIGASLTYRF 421
                    +Y+F
Sbjct: 416 KGMYYSVQYSYQF 428