Pairwise Alignments

Query, 309 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 327 a.a., transcriptional regulator, LysR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  158 bits (400), Expect = 1e-43
 Identities = 104/305 (34%), Positives = 149/305 (48%), Gaps = 10/305 (3%)

Query: 1   MDLLNAIRCFIKVVEAGSIAAGARILGLSPAAVSQNLARLEGHLQVRLLSRTTRSMALTP 60
           M  L+ IR F++V E GS++A  R L +SPA  S  +++LE HL VRL  RTTRS+A T 
Sbjct: 18  MSYLDNIRTFVRVYELGSMSAAGRDLRISPAVTSSRISQLEEHLGVRLFQRTTRSLAPTD 77

Query: 61  SGAQYYERVKHIERDLALAEQAVTTPDSEPQGRLCIASTSAFGRHVLAPLIPAFSARYPL 120
            G  ++     +   +  AE  V      P+G L +A+    GR ++AP +P F   YP 
Sbjct: 78  QGKTFFGAACEVLEAVENAEAQVINMTDNPKGSLYVAAPLGVGRRLIAPQVPGFLELYPE 137

Query: 121 LSIELVTTDRRVNHAREDVDVSLRIAPQLEDQLLARRIARIPFICCASPGYLQSAGVPAT 180
           + + L  TDR+V+   E +D++  +    +  L  R+IA +  + CASP Y+   G P  
Sbjct: 138 VRMRLRMTDRKVDLTTEGLDLAFFLGHPEDSNLRIRKIADVRRVLCASPDYIARRGHPQN 197

Query: 181 PEAL--RGHRCLVFRYPVDGRFLRWGFMRDGLRFEAEFGTVLISDDIDALTQMALHDGGI 238
            +AL   GH CL  R+P    F +W  + D             SDD D LT  AL   GI
Sbjct: 198 GDALVSEGHECLNLRFPGATEF-QWRLVTDQGPKRFRVAGRYESDDGDVLTDWALAGHGI 256

Query: 239 TRLAEFIVRPHLASGALVPLFEYCDSSQAYAQTEPMDIYLCLADRFAMTTKVRAFMDYLR 298
                F V  HL  G LVP+   C+ +      EP+ +      R     K R FM+Y+ 
Sbjct: 257 AMKPVFEVTDHLQDGRLVPV---CEDT----PPEPIQMACLFTHRKRQDPKTRLFMEYII 309

Query: 299 ECLGD 303
           E + D
Sbjct: 310 EKISD 314