Pairwise Alignments

Query, 235 a.a., regulator of DnaA that prevents premature reinitiation of DNA replication from Pseudomonas putida KT2440

Subject, 467 a.a., chromosomal replication initiator protein DnaA from Vibrio cholerae E7946 ATCC 55056

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 13/227 (5%)

Query: 19  FINYYPG-ANAAALGYVERLCEADAGWTESLIYLWGKQGVGRSHLLQAATHRFQQRGEPA 77
           F N+  G +N   L    ++ + + G   + ++L+G  G+G++HLL A  +        A
Sbjct: 138 FNNFVEGKSNQLGLAAARQVSD-NPGAAYNPLFLYGGTGLGKTHLLHAVGNAIVDNNPNA 196

Query: 78  --VYLPLAQLLDRGVELLD---------YLAQYELVCIDDLHVIAGKADWEEAMFHLFNR 126
             VY+   + +   V+ L          Y    + + IDD+   A K   +E  FH FN 
Sbjct: 197 KVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNA 256

Query: 127 LRDSGRRLLLAASASPRELPIKLPDLKSRLTLALVFQMRGLSDEDKLRALQLRASRRGLH 186
           L +  ++++L +   P+E+      LKSR    L   +     E ++  L  +A    +H
Sbjct: 257 LLEGNQQIILTSDRYPKEISGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKAEDHQIH 316

Query: 187 LTDEVGHFILTRGARSMSALFDLLERLDQASLQAQRKLTIPFLKETL 233
           L DEV  FI  R   ++  L   L R+   +    R +TI F++E L
Sbjct: 317 LPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREAL 363