Pairwise Alignments

Query, 235 a.a., regulator of DnaA that prevents premature reinitiation of DNA replication from Pseudomonas putida KT2440

Subject, 236 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  182 bits (461), Expect = 6e-51
 Identities = 102/234 (43%), Positives = 146/234 (62%), Gaps = 3/234 (1%)

Query: 1   MKPPIQLPLGVRLRDDATFINYYPGANAAALGYVERLCEADAGWTESLIYLWGKQGVGRS 60
           +  P+QL L V L DD TF +YYP A    L  +++L     G  E+ IY+WG    GR+
Sbjct: 3   LNSPLQLSLPVYLPDDETFNSYYPAAGNDEL--IQKLRANAEGHGEAAIYVWGPVKSGRT 60

Query: 61  HLLQAATHRFQQRGEPAVYLPLAQLLDRGVELLDYLAQYELVCIDDLHVIAGKADWEEAM 120
           HL+ AA     +    + YLPL         LL+ L Q +L+CIDD+  IAG   WEEA+
Sbjct: 61  HLMHAACAHANELDRRSFYLPLGIHASISTALLEGLEQLDLICIDDVDDIAGHPVWEEAI 120

Query: 121 FHLFNRLRDSGR-RLLLAASASPRELPIKLPDLKSRLTLALVFQMRGLSDEDKLRALQLR 179
           F L+NR+ ++ R  L+++  ++P +    LPDL SR+   L +Q++ ++D++KL ALQ R
Sbjct: 121 FDLYNRVAENKRCALVVSGRSAPADAGFLLPDLVSRMQWGLNYQLQPMADDEKLAALQRR 180

Query: 180 ASRRGLHLTDEVGHFILTRGARSMSALFDLLERLDQASLQAQRKLTIPFLKETL 233
           A+ RGL L ++VG F+L R AR +  LFD+L++LD+ASL  QRKLTIPF KE L
Sbjct: 181 AAMRGLQLPEDVGRFLLNRMARDLRTLFDVLDKLDKASLVHQRKLTIPFAKEML 234