Pairwise Alignments

Query, 452 a.a., 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD from Pseudomonas putida KT2440

Subject, 400 a.a., 23S rRNA (cytosine(1962)-C(5))-methyltransferase from Klebsiella michiganensis M5al

 Score = 42.7 bits (99), Expect = 2e-08
 Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 306 ADERVLDLFCGLGNFAL-PLARQAREVVAVEGVQAMVDRAAANARNN--NVHNARFFQAD 362
           AD+RVL+ F   G FA+  L    R+VV+V+  Q  +D A  N   N  ++  A F + D
Sbjct: 224 ADKRVLNCFSYTGGFAISALMGGCRQVVSVDTSQEALDVARQNVELNKLDLSKAEFIRDD 283

Query: 363 LSQPLAGTGWAAEGFSAVLLDPPR 386
           + + L     A E F  +++DPP+
Sbjct: 284 VFKLLRKYRDAGEKFDVIVMDPPK 307