Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 916 a.a., chemotaxis protein CheY from Pseudomonas fluorescens FW300-N2E3

 Score = 1327 bits (3433), Expect = 0.0
 Identities = 686/917 (74%), Positives = 775/917 (84%), Gaps = 1/917 (0%)

Query: 1   MLDRLGIRSRVLLLALLPAGLMALVLGSYFTWLQQNDLRTQLLQRGKMIAEQLAPLAAPA 60
           +L +LGI+ RVLLL LLP  LMALVLG YFTW+QQ+DL+TQLLQRG+MIAEQLAPL APA
Sbjct: 1   VLKKLGIKGRVLLLTLLPTSLMALVLGGYFTWMQQSDLQTQLLQRGEMIAEQLAPLVAPA 60

Query: 61  MARLAPAQLERIAAQTLEQADVRAVAFLAPDRTRLAHAGPSMLNLPPSGGTGTQLLQRSG 120
           M       LERIA Q+LEQ DVRAV+FLAPDRT+LAHAGP MLN PP+G +   +LQR+G
Sbjct: 61  MGHKNDDLLERIATQSLEQPDVRAVSFLAPDRTQLAHAGPLMLNQPPTGESA-HMLQRTG 119

Query: 121 NDATRYLMPVFGHHRDLATDAVPAEAERLLGWVEIELSHDGTLLRGYRNLFTSLLLILAC 180
           NDATRYL+PVFG HR+LA + +P E++RLLGWVE+ELSH+G LLRGYR+LF S+LLI A 
Sbjct: 120 NDATRYLLPVFGRHRNLAGELIPDESDRLLGWVELELSHNGMLLRGYRSLFASVLLIAAG 179

Query: 181 LALSGLLALRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDELAHGINRMAETL 240
           L  + LLALRM RTIN P+  IK AV QLK+GHLE RLP +GS ELDELA GINRMA TL
Sbjct: 180 LVGTALLALRMGRTINTPLNLIKQAVAQLKEGHLETRLPPLGSQELDELASGINRMASTL 239

Query: 241 QNAHEELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSHEIRTP 300
           QNA EELQHSIDQATEDVRQNLETIEIQNIELD+ARKEALEASRIKSEFLANMSHEIRTP
Sbjct: 240 QNAQEELQHSIDQATEDVRQNLETIEIQNIELDLARKEALEASRIKSEFLANMSHEIRTP 299

Query: 301 LNGILGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFN 360
           LNGILGFTHLLQKSE+TPRQLDYL TIEKSAD+LLGIINEILDFSKIEAGKLVLDSIPFN
Sbjct: 300 LNGILGFTHLLQKSELTPRQLDYLGTIEKSADSLLGIINEILDFSKIEAGKLVLDSIPFN 359

Query: 361 LRDLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTNLVSNAIKFTREG 420
           LRDL+QDTLTILAPAAHAKQLEL+SL+YRDTP SLVGDPLRLKQILTNLVSNAIKFTREG
Sbjct: 360 LRDLLQDTLTILAPAAHAKQLELVSLVYRDTPLSLVGDPLRLKQILTNLVSNAIKFTREG 419

Query: 421 TIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQPGGTGLGLV 480
           TIV RAMLE+EHED  QLRIS+QDTGIGLS QDVR LFQAFSQADNSL+RQPGGTGLGLV
Sbjct: 420 TIVARAMLEEEHEDSVQLRISIQDTGIGLSNQDVRALFQAFSQADNSLSRQPGGTGLGLV 479

Query: 481 ISKRLIEQMGGEIGVDSTPGEGSQFWISLNLPKAHDDAEALPPQPLLGRRAAIVDGHELA 540
           ISKRLIEQMGGEIGVDSTPGEGS+FW+SL+LPK  DDAE LP  PLLGRR A+++ HELA
Sbjct: 480 ISKRLIEQMGGEIGVDSTPGEGSEFWVSLSLPKTRDDAEDLPGPPLLGRRVAVLENHELA 539

Query: 541 RQALEHQLEDCGLSVSLFASYDQLLQGVQAASQAGLPFEFAVLGANLGNLSPEQLGHYHQ 600
           RQAL+HQLEDCGL V+ F + + L  GV  A Q     + AVLG    ++ PE+L  +  
Sbjct: 540 RQALQHQLEDCGLEVTPFNTLESLTNGVTGAHQTEQAIDLAVLGITSNDMPPERLNQHIW 599

Query: 601 QLERYHCQCVVLCPTTEQALYHPYLPNGHGQLLSKPTCTRKLRRLLLELVQPRRPLAEGS 660
            LE   C+ +VLCPTTEQ L+H  +PN H QL +KP CTRKLRR L +LV PR+   E  
Sbjct: 600 DLEHLGCKVLVLCPTTEQTLFHLSVPNPHSQLQAKPACTRKLRRALSDLVNPRQLRNEPG 659

Query: 661 NPNGQRRPKILCVDDNAANLLLVKTLLEDLGAEVLAVNNGYAAVQAVQEELFDLVLMDVQ 720
            P   R PK+LCVDDN ANLLLV+TLLED+GA+VLAV +GYAAV+AVQ E FDLVLMDVQ
Sbjct: 660 EPISSRAPKVLCVDDNPANLLLVQTLLEDMGAKVLAVESGYAAVKAVQTEAFDLVLMDVQ 719

Query: 721 MPGMDGRACTEQIRLWENTQSGNPLPIVALTAHAMANEKRALLHSGMDDYLTKPISERQL 780
           MPGMDGR  TE IR WE+ +   PLPIVALTAHAMANEKRALL SGMDDYLTKPISERQL
Sbjct: 720 MPGMDGRQSTEAIRQWESERHCTPLPIVALTAHAMANEKRALLQSGMDDYLTKPISERQL 779

Query: 781 AQVVMKWTGLSLGTPQQAQAELLTNGDELKVLDPEEGLRLAAGKADLAADMLSMLLASLD 840
           AQVV+KWTGL+L      +A++  N  +L VLDP+EGLRLAAGKADLAADML+MLLASL+
Sbjct: 780 AQVVLKWTGLALRNHGPERADVYGNNSDLLVLDPDEGLRLAAGKADLAADMLAMLLASLE 839

Query: 841 TDREAIRAARAADDRNGLIEQVHRLNGASRYCGVPQLRAACQRSETLLKQDNPQAQQALD 900
            DREAIR AR ++D+N LIE+VHRL+GA+RYCGVPQLRAACQRSETLLKQ +P+A  AL+
Sbjct: 840 ADREAIRVARESNDQNALIERVHRLHGATRYCGVPQLRAACQRSETLLKQQDPKAVVALE 899

Query: 901 ELDSAISRLAAQARLSA 917
           EL+ AI+RLA+QAR+ A
Sbjct: 900 ELERAINRLASQARIGA 916