Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 948 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  268 bits (686), Expect = 9e-76
 Identities = 168/521 (32%), Positives = 281/521 (53%), Gaps = 23/521 (4%)

Query: 284 RIKSEFLANMSHEIRTPLNGILGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILD 343
           + K++FL+ +SHE+RTP+NG+LG + LL  + ++ +Q DY+ TI  S + LL +INEILD
Sbjct: 424 KTKADFLSKISHELRTPMNGVLGMSELLLGTSLSAKQRDYVQTIHSSGNELLNLINEILD 483

Query: 344 FSKIEAGKLVLDSIPFNLRDLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLK 403
            SK+E+G++ LD + F+   LI+D L+I    A  +++EL+S I    P  + GDP RL+
Sbjct: 484 ISKLESGQIELDDVQFDFNALIEDCLSIFRAKAEQQKVELISFIQPQLPQVVAGDPTRLR 543

Query: 404 QILTNLVSNAIKFTREGTIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQ 463
           Q L NL+ NA K T EG +++ A + D  +D  +LRI+VQD+G  L P +   L  A   
Sbjct: 544 QTLLNLLENAFKQTDEGEVLLIAAV-DGPQDNPRLRITVQDSGRPLEPYERDALLNAAVD 602

Query: 464 ADNSLARQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSQFWISLNLPK---AHDDAEA 520
           + + LA    G  LGL+I+++L++ M G+ G+ +   +G+  WISL L     A ++A+ 
Sbjct: 603 SHDFLASTRHGGRLGLIIARQLVQLMDGDFGIQTGTTQGNTLWISLPLASEGLAQNNADL 662

Query: 521 LPPQPLLGRRAAIVDGHELARQALEHQLEDCGLSVSLFASYDQLLQGVQAASQAGLPFEF 580
               PL G R  IVD ++  R+ L  Q    GL VS  AS  + L  ++  +     F+ 
Sbjct: 663 --DGPLQGTRLLIVDDNDTCRKVLVQQCSAWGLEVSAVASGKEALALLRTKAHLREYFDV 720

Query: 581 AVLGANLGNLSPEQLGHYHQQLERYHCQCVVLCPTTEQALYHPYLPNGHG--QLLSKPTC 638
            +L  ++  ++  QL    ++    +   +++  T   +     +    G  ++L+KP  
Sbjct: 721 VLLDQDMPGMTGMQLASKIKEDSSLNHDILLIMLTGMGSAPSKIIARNAGIKRILAKPVA 780

Query: 639 TRKLRRLLLELVQPR------------RPLAEGSNPNGQRRPKILCVDDNAANLLLVKTL 686
              L+  L + +  R             PLA    P+  R   IL  +DN  +  +++ +
Sbjct: 781 GYTLKTTLADELAQRLQSSQLRPALASPPLAPLEVPSDFR---ILVAEDNNISTKVIRGM 837

Query: 687 LEDLGAEVLAVNNGYAAVQAVQEELFDLVLMDVQMPGMDGRACTEQIRLWENTQSGNPLP 746
           L  L  +     NG  A++A++ + +DLVLMD +MP +DG   T+Q+R WE     +  P
Sbjct: 838 LNKLNLQPDTACNGEEALEAIKTQPYDLVLMDCEMPVLDGFQATQQLREWEARNGRSRTP 897

Query: 747 IVALTAHAMANEKRALLHSGMDDYLTKPISERQLAQVVMKW 787
           +VALTAH ++  +     +GMD ++ KP+    L +++  W
Sbjct: 898 VVALTAHILSEHRERAREAGMDGHMAKPVELSHLRELIDHW 938