Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 759 a.a., putative two-component sensor histidine kinase/response regulator hybrid protein from Phaeobacter inhibens DSM 17395

 Score =  311 bits (797), Expect = 1e-88
 Identities = 247/805 (30%), Positives = 379/805 (47%), Gaps = 76/805 (9%)

Query: 2   LDRLGIRSRVLLLALLPAGLMALVLGSYFTWLQQNDLRTQLLQRGKMIAEQLAPLAAPAM 61
           + R GI  ++++   L A L+A  +G      +  +L+ QL ++ ++    L+ L     
Sbjct: 1   MKRTGILFQIVVSLSLAALLVAAAIGDVARRYETRNLQAQLKEQAELTISLLSGL----- 55

Query: 62  ARLAPAQLERIAAQTLEQADVRAVAFLAPDRTRLAHAGPSMLNLPPSGGTGTQLL----- 116
                  LE I  + +   +   +  +A +        P +L +      GT +      
Sbjct: 56  ------MLESIIVEDVPVLETGLIEAIARN--------PKLLQIQIQNSAGTPIAEAGEI 101

Query: 117 -QRSGNDATRYLMPVFGHHRDLATDAVPAEAERLLGWVEIELSHDGTLLRGYRNLFTSLL 175
            Q   +D   Y  P+     D     V          V+ ++S   T++     +    +
Sbjct: 102 DQVGPDDFVMYDRPITLDGFDFGRMVVHWSTREGQAMVQHKVSQ--TIMW---TVVAVAI 156

Query: 176 LILACLALSGLLALRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDELAHGINR 235
           L L  L L  +LALR  + I+   +R+  A+  L    L+ RLP   S E   L   +  
Sbjct: 157 LSLLVLILVSVLALRPLQIIH---QRMSGAIAGLSG--LQARLPWFASREFRALNFSVGV 211

Query: 236 MAETLQNAHEELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSH 295
           + +T     E                      +   L+ ARK A  A+R KSEFLANMSH
Sbjct: 212 LEDTFSERDE----------------------REYALEEARKAADIANRAKSEFLANMSH 249

Query: 296 EIRTPLNGILGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILDFSKIEAGKLVLD 355
           EIRTP+NG++G   L+ ++++   Q  Y  TI KS   LL IIN+IL+FSKIEAGK+ L+
Sbjct: 250 EIRTPMNGVIGMAELILETDLDEDQTMYAETISKSGSALLTIINDILNFSKIEAGKMELE 309

Query: 356 SIPFNLRDLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTNLVSNAIK 415
             PFNL+  I+D +T+L+P A  K +E+        P    GD  R++QILTN+  NA+K
Sbjct: 310 RAPFNLQTAIEDVVTLLSPKAAEKNVEVTLRYDPSLPECYEGDVGRIRQILTNVAGNAVK 369

Query: 416 FTREGTIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQPGGT 475
           FT +G + +    E + +D   LRISV DTG G+    +  +F AF QAD +  R   GT
Sbjct: 370 FTGKGYVYIEVSGETD-DDRTALRISVTDTGAGIPEDRLDRIFNAFEQADGAATRNYEGT 428

Query: 476 GLGLVISKRLIEQMGGEIGVDSTPGEGSQFWISLNL------PKAHDDAEALPPQPLLGR 529
           GLGL IS RL+E MGG I V S  G+GS F I L L      PK   DA     +   G 
Sbjct: 429 GLGLAISTRLLELMGGRISVQSELGKGSVFAIDLPLRIRPSQPKRAQDA-----RDFKGL 483

Query: 530 RAAIVDGHELARQALEHQLEDCGLSVSLFASYDQLLQGVQAASQAGLPFEFAVLGANLGN 589
           RA +VD  EL R  L  +L   G+      S  Q L+ +  +   G  ++  +    +  
Sbjct: 484 RALVVDDLELNRIILTERLATWGVQSVAAGSAHQALELLLDSRHDGTHYDVILQDFQMPG 543

Query: 590 LSPEQLGHYHQQLERYHCQCVVLCPTTEQALYHPYLPN-GHGQLLSKPTCTRKLRRLLLE 648
           +  ++L    + +  Y    +V+  + E  +      + G  ++  KP    +L+ ++  
Sbjct: 544 MDGKELAERIRDIPEYRDLPIVILSSVENTIDREAREHLGRCEVALKPLRAAQLQSVMSR 603

Query: 649 LVQ------PRRPLAEGSNPNGQRRPKILCVDDNAANLLLVKTLLEDLGAEVLAVNNGYA 702
           +++      P+    +G   +     K+L  +DN  N L+V  +L+    EVL   NG  
Sbjct: 604 VLETATEEAPQAVPPQGVETSVVPEVKLLLAEDNRTNQLVVSRMLKAAPIEVLIAANGEE 663

Query: 703 AVQAVQEELFDLVLMDVQMPGMDGRACTEQIRLWENTQSGNPLPIVALTAHAMANEKRAL 762
           AV   QE   D+VLMD+ MP  DG   T +IR  E        P+VALTA+A+ + +   
Sbjct: 664 AVTMFQEHHPDIVLMDMMMPVKDGIDATAEIRQLEKDNGLGRCPVVALTANALQSHREEC 723

Query: 763 LHSGMDDYLTKPISERQLAQVVMKW 787
           L +GMDD+L+KPI+++ L   V KW
Sbjct: 724 LAAGMDDFLSKPINKKALLGAVGKW 748