Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 931 a.a., signal transduction histidine kinase from Dechlorosoma suillum PS

 Score =  287 bits (735), Expect = 2e-81
 Identities = 248/815 (30%), Positives = 367/815 (45%), Gaps = 79/815 (9%)

Query: 149 LLGWVEIELSHDGTLLRGYRNLFTSLLLILACLALSGLLALRMSRTINDPIERIKHAVNQ 208
           ++G +E+  S DG      R     LL+ +  +  + L A R+   I  P+ R++ A   
Sbjct: 135 VVGHIELLASRDGYWDAVGRGALIWLLVTVLSMLAAVLAARRLQHIIAAPVVRLEQATRD 194

Query: 209 L----KDGHLEERLPTMGSHELDELAHGINRMAETLQNAHEELQHSIDQATEDVRQNLET 264
           +    +     ER  +    E+  L    N M   ++   E L    +   E V    E 
Sbjct: 195 ITRHKRFSLRVEREESGSEDEVGRLIDSFNAMLAEIEQRDERLARYRESLEEMVASRTE- 253

Query: 265 IEIQNIELDMARKEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSEMTPRQLDYL 324
                 EL  +R  A EASR+KS FLA MSHEIRTPLNG+LG   LLQ + ++  Q    
Sbjct: 254 ------ELTHSRDAAEEASRVKSRFLATMSHEIRTPLNGVLGMIRLLQTTALSGDQRRMT 307

Query: 325 NTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFNLRDLIQDTLTILAPAAHAKQLELL 384
               +S + LL ++N++LDFSKIEAGKL +D++PF+L D ++    +LAP A  K LEL 
Sbjct: 308 EAALRSGETLLNVLNDVLDFSKIEAGKLTVDAVPFDLADTVESAALLLAPNAREKGLELA 367

Query: 385 SLIYRDTPASLVGDPLRLKQILTNLVSNAIKFTREGTIVVR-------AMLEDEHEDCAQ 437
             +  + P +L GDP RLKQ+L NL+ NA+KFT +G + +R       A    E  D   
Sbjct: 368 VHLKGELPVTLAGDPNRLKQVLFNLLGNAVKFTEQGEVCLRVERSPGAAGDSRERGDVIL 427

Query: 438 LRISVQDTGIGLSPQDVRTLFQAFSQA----------DNSLARQPGGTGLGLVISKRLIE 487
           LR +V+DTG G+   +   LFQA+SQ           + + +R+  GTGLGL IS+ L+ 
Sbjct: 428 LRFTVRDTGPGIPESEQGKLFQAYSQTSAASQTPAEIEEAASRRAEGTGLGLAISRELVR 487

Query: 488 QMGG-EIGVDSTPGEGSQFWISLNLPKAHDDAEALPPQPLLGRRAAIVDGHELARQALEH 546
            MG  ++ V S PGEG +F   L      D+   +      G R  +++        L+ 
Sbjct: 488 LMGARDLTVSSRPGEGCEFSFELPFHVVRDNPTGI---HYPGFRLVLLEPQPTLALILQD 544

Query: 547 QLEDCGLSVSLF--ASYDQLLQGVQAASQAGLPFEFAVLGANLGNLSPEQLGHYHQQLER 604
             +  GL   L   A   + L G  AA             A L +L   QL     Q   
Sbjct: 545 YAQSLGLDCRLARNAPEAERLLGEGAAQ------------AVLADLCYLQLPEATWQDWH 592

Query: 605 YHCQCV-VLCPTTEQALYHPYLPNGHGQLLSKPTCTRKLRRLLLE--LVQPR-------- 653
             C  V +       +     L     Q LSKP   ++  R + +  +V PR        
Sbjct: 593 RRCGGVWIALSDFGASTLEGELAQVFAQRLSKPVSRKEFVRSIGQAFMVAPRGAELPPAA 652

Query: 654 -------RPLAEGSNPNGQRRPKILCVDDNAANLLLVKTLLEDLGAEVLAVNNGYAAVQA 706
                  RP A       +   K+L V+DN  N  + + LL+  G +V   N+G  A++ 
Sbjct: 653 GWQGAAWRPAAAAVPNRPRFHGKVLLVEDNLTNQEVTRGLLQVFGCQVEVANHGREALEK 712

Query: 707 VQEELFDLVLMDVQMPGMDGRACTEQIRLWENTQSGNPLPIVALTAHAMANEKRALLHSG 766
             E  FDL+LMD QMP MDG   + ++R  E      P  I+ALTA++ A +++  L +G
Sbjct: 713 WAERDFDLILMDCQMPVMDGLTASRELRQREIQAGRLPTAIIALTANSFAEDRQRCLAAG 772

Query: 767 MDDYLTKPISERQLAQVVMKWTGLSLGTPQ---QAQAELLTNGDELKVLDPEEGLRLAAG 823
           M+ +L KP  E  L  ++  W G   G  Q   QA+ E      E   L     L   A 
Sbjct: 773 MNGFLPKPFDELALVALLTDWLGPPEGGAQVRVQARPE-----REAGALLDAAVLDAIAA 827

Query: 824 KADLAADMLSMLLASLDTD--REAIRAAR--AADDRNGLIEQVHRLNGASRYCGVPQLRA 879
           + + A ++ S+ LA   +    +A +A +  A DD     E  H L  A+   G   L  
Sbjct: 828 RQEEAGEVRSIFLARFVSTFLAQASQALQNMAQDDLAAAREAAHSLKSAAASIGARPLSE 887

Query: 880 ACQRSETLLKQDNPQAQQALDELDSAISRLAAQAR 914
              R E   ++      + L E   ++ +L A  R
Sbjct: 888 LAARVEAAAREGQAAEVRRLGE---SLPQLLADTR 919