Pairwise Alignments

Query, 274 a.a., tRNA 2-thiocytidine biosynthesis protein TtcA from Pseudomonas putida KT2440

Subject, 324 a.a., tRNA 2-thiocytidine biosynthesis TtcA family protein from Methanococcus maripaludis JJ

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 20/181 (11%)

Query: 4   LSVNQNKLQKRLRRLAGEAITDYNMIEDGDKVMVCLSGGKDSYTMLDVLLHLQKVAPITF 63
           + V  +++ + +    G  ++  N+I   DK++V LSGGKDS  +L +L   ++   +  
Sbjct: 47  IPVVYSRVFEEISERMGRFVSKNNIISPKDKILVGLSGGKDSLALLHLLEPYRRKYGV-- 104

Query: 64  EIVAVNMDQKQPGFPE--------HVLPAYLKELGVEYHIVEKDTYSV-VKELVPEGK-- 112
           +I AV +D    G             +  + K L + + I+  D   V + +++ E    
Sbjct: 105 QIYAVTVDLNINGIRPWTESNKNVEKIAEHCKNLNIPHKIIAHDGNVVEMSKILSENTKG 164

Query: 113 ---TTCSLCSRLRRGTLYTFA----DEIGATKMALGHHRDDIVETFFLNMFFNGALKGMP 165
              + C  CS +RR  L  +A    +     K+A+GH  +D  +T   N+F    +K + 
Sbjct: 165 IEYSPCFSCSMVRRHVLTNYAKNNFESDSNVKIAIGHTLEDNSDTIMANIFKGNIIKALE 224

Query: 166 P 166
           P
Sbjct: 225 P 225