Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  169 bits (428), Expect = 7e-47
 Identities = 101/279 (36%), Positives = 150/279 (53%), Gaps = 13/279 (4%)

Query: 1   MRFTLRQMQVFVAVAQHQSVSRAASLLALSQSAASTSITELERQSSCQLFDRAGKRLALN 60
           MR++L+Q+ VF AVA   SVS+AA  LAL+QSA S S+ +LE+     LF+R GK++AL 
Sbjct: 1   MRYSLKQLAVFDAVADCGSVSQAADKLALTQSATSMSLAQLEKMLGRPLFERQGKQMALT 60

Query: 61  ALGHQLLPQAVALLDQAKEIEDLLNGKSGF-------GSLAVGATLTIGNYLATLLIGNY 113
             G  L P+A  LL  A++IE       GF       G + +GA+ T   +L   LI   
Sbjct: 61  HWGMWLRPKAKRLLQDAQQIE------MGFYDQHLLSGEIRLGASQTPAEHLVPDLISII 114

Query: 114 MQTHPESQVKLHVQNTAHIVQQVAHYEIDLGLIEGDCNHPDLEVQPWVEDELVVFCAPQH 173
               PE ++ L V++T  +++ V  Y+ DLG+IEG C+   +  + W  D L +  +  H
Sbjct: 115 DSDFPEIRISLGVKSTKGVIEGVLDYKYDLGIIEGRCDDNRIYQEVWCRDHLTIVASAHH 174

Query: 174 PLAKLGRADIESLSQEAWILREQGSGTRLTFDQAMRHHRANLNIRLELEHTEAIKRAVES 233
           P AK     +  L Q  W+LREQG+GTR  FD  +     +L++  E EH   ++  V +
Sbjct: 175 PFAKRESVSLAQLEQAKWVLREQGAGTRNIFDSVIHPLIPDLDVWREYEHVPVLRTLVAN 234

Query: 234 GLGIGCISRLALRDAFRRGSLVPVETPELDLLRQFYFIW 272
           G  + C+  L +      G LV +  PEL++ R   FIW
Sbjct: 235 GPYLTCLPYLDVERFIESGLLVALNVPELNMERTLSFIW 273