Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 315 a.a., RuBisCO transcriptional regulator cbbR, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  125 bits (315), Expect = 1e-33
 Identities = 86/277 (31%), Positives = 139/277 (50%), Gaps = 6/277 (2%)

Query: 4   TLRQMQVFVAVAQHQSVSRAASLLALSQSAASTSITELERQSSCQLFDRAGKRLALNALG 63
           TLRQMQ+F AVA+H S S AA  L L+Q A S  I ++E  +   LF++ G+ L L   G
Sbjct: 5   TLRQMQIFDAVARHLSFSNAARELGLTQPAVSLQIKQIEALAGLPLFEQMGRVLLLTQAG 64

Query: 64  HQLLPQA---VALLDQAKEIEDLLNGKSGFGSLAVGATLTIGNYLATLLIGNYMQTHPES 120
             LL      +A +  A +  D L GK   G+L +G   T   Y A  L+  +   +P  
Sbjct: 65  TILLGHVRTILAAVTDADKAMDALKGKRA-GALRIGVVST-AKYFAPRLLSVFTAGYPGV 122

Query: 121 QVKLHVQNTAHIVQQVAHYEIDLGLIEGDCNHPDLEVQPWVEDELVVFCAPQHPLAKLGR 180
           ++ L V N   I+  +    +DL ++      P +  + +  + +V+  A  HPL +  +
Sbjct: 123 ELGLTVANREQILGMIQENALDLFIMGRPPTEPAVRAERFAPNPMVMVAASDHPLVRR-K 181

Query: 181 ADIESLSQEAWILREQGSGTRLTFDQAMRHHRANLNIRLELEHTEAIKRAVESGLGIGCI 240
                LS E +++RE GSGTR+  ++ M  H    +  +E+   E IK+AV +G+GI  +
Sbjct: 182 LTFHDLSGETFLMREPGSGTRILMEKLMTDHGVLPHRMIEMSSNETIKQAVMAGMGISLL 241

Query: 241 SRLALRDAFRRGSLVPVETPELDLLRQFYFIWHKQKY 277
           SR  +      G LV ++   L + R +Y +  + K+
Sbjct: 242 SRNTMSLELSVGRLVILDVEGLPIQRDWYVVIREGKH 278