Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 216 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  343 bits (879), Expect = 2e-99
 Identities = 174/216 (80%), Positives = 196/216 (90%)

Query: 1   MATYEILIADDHPLFRGALRQAVTLGLGSDVRLVEVASIAELETRLSEKADWDLVLLDLN 60
           MA YEI+IADDHPLFR AL+QA+T+GLG +VRLVE ASIAELET L++ ADWDLVLLDLN
Sbjct: 1   MAAYEIIIADDHPLFRSALQQALTMGLGENVRLVEAASIAELETFLNQGADWDLVLLDLN 60

Query: 61  MPGAYGFSGLVLLRGQYPQIPVVMVSAQEEAAVVVKSREFGASGFIPKSSTLEVIQDAVR 120
           MPGAYGFSGLVLLRGQYP +PVVM+SAQE+AAVV +SREFGASGFIPKSS+LE IQ+AVR
Sbjct: 61  MPGAYGFSGLVLLRGQYPHLPVVMISAQEDAAVVARSREFGASGFIPKSSSLETIQEAVR 120

Query: 121 KVLDGEVWWPPQAFEKVDVSAEAKAASEGLASLTPQQFRVLTMVCEGLLNKQIAYELSVS 180
            VLDG+VWWP    +  +VS EAKAAS GLASLTPQQFRVLTMVC+GLLNKQIAYEL+VS
Sbjct: 121 AVLDGDVWWPSNIQDVANVSDEAKAASAGLASLTPQQFRVLTMVCDGLLNKQIAYELNVS 180

Query: 181 EATIKAHVTAIFRKLGVRTRTQAALLLQQLESVASN 216
           EATIKAHVTAIFRKLGVRTRTQAALLLQQ+ S+ ++
Sbjct: 181 EATIKAHVTAIFRKLGVRTRTQAALLLQQMGSIPTS 216