Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 219 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score = 93.6 bits (231), Expect = 3e-24
 Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 3/199 (1%)

Query: 5   EILIADDHPLFRGALRQAVTLGLGSDVRLVEVASIAELETRLSEKADWDLVLLDLNMPGA 64
           +IL+ DDH + R      +   L  +V + E AS  +   ++ +     LV+LDL +PG 
Sbjct: 2   KILLVDDHAVVRQGYASLLK-ALLPEVTVSEAASGEQALEQVQQSIP-SLVVLDLGLPGI 59

Query: 65  YGFSGLVLLRGQYPQIPVVMVSAQEEAAVVVKSREFGASGFIPKSSTLEVIQDAVRKVLD 124
            G      LR + P +PV++ S  +E A+V ++ + GASG++ K    +V+ +AVRKVL 
Sbjct: 60  SGLETCRRLRQRLPLMPVLIFSMHDELALVRQALDAGASGYLTKRCAPDVLVEAVRKVLA 119

Query: 125 GEVW-WPPQAFEKVDVSAEAKAASEGLASLTPQQFRVLTMVCEGLLNKQIAYELSVSEAT 183
           G+ +   P A +          A   LA +TP++  +  M+  G+ N++IA  L +S  T
Sbjct: 120 GQTFIEQPLATDLACQRPSHSPAKGRLAEMTPREMEIFIMLARGIGNREIAERLCISSKT 179

Query: 184 IKAHVTAIFRKLGVRTRTQ 202
           +  H+  +  KLGV ++ +
Sbjct: 180 VSNHMALLKSKLGVSSQAE 198