Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 221 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  157 bits (398), Expect = 1e-43
 Identities = 91/217 (41%), Positives = 128/217 (58%), Gaps = 7/217 (3%)

Query: 4   YEILIADDHPLFRGALRQAVTLGLGSDVRLVEVASIAELETRLSEKADWDLVLLDLNMPG 63
           Y+ILIADDHPLFR A+   +  G   D  ++E A +        E  D DLVLLDLNMPG
Sbjct: 2   YKILIADDHPLFREAIHNVIRDGF-PDSEILETADLDSALALTLEHDDLDLVLLDLNMPG 60

Query: 64  AYGFSGLVLLRGQYPQIPVVMVSAQEEAAVVVKSREFGASGFIPKSSTLEVIQDAVRKVL 123
            +G +GL+ LR + P IPVV+VSA+++  +V+++  +GA GFI KSS    + DA+ ++L
Sbjct: 61  MHGLNGLINLRNEAPTIPVVIVSAEQDKQIVLQAITYGAVGFITKSSPRAQMTDAIEQIL 120

Query: 124 DGEVWWPPQAFEKVDVSA------EAKAASEGLASLTPQQFRVLTMVCEGLLNKQIAYEL 177
           +G V+ P         ++      E     E L +LT +Q  VL  + +G  NKQIAY L
Sbjct: 121 NGNVYLPSDIIRSQKPTSRHSHHNEQSIPPELLQALTRKQLLVLERMTKGESNKQIAYNL 180

Query: 178 SVSEATIKAHVTAIFRKLGVRTRTQAALLLQQLESVA 214
            ++E T+KAHV+AI RKL V  R QA L    ++  A
Sbjct: 181 DIAETTVKAHVSAILRKLNVHNRVQAILSAGDIDFTA 217