Pairwise Alignments

Query, 372 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 451 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 48.5 bits (114), Expect = 4e-10
 Identities = 62/301 (20%), Positives = 122/301 (40%), Gaps = 34/301 (11%)

Query: 5   SNELLFSHFRDNNIDLSNIEAQLQLVAPNSPNLPLYRDMMLT--------ILRMAHDDSD 56
           +++ LF  + D +I +   E  ++L   N P        ++T        +LR     SD
Sbjct: 50  NSKALFEQYSDFDIHVLQRERGVKLELINPPEQAFVDGQIITGIQEHLFSVLRDILYISD 109

Query: 57  RW---------SAKITLQALRELDQSFRTLQRYKDRRKVTVFGSARTPLEHPMYALAREL 107
           ++         +A      + ++ ++ R +   KD   V  +G     +    Y   RE+
Sbjct: 110 KYDTLKHINLTNASHITNVVFDILRNARAIAPMKDPNVVVCWGGHS--INAIEYQYTREV 167

Query: 108 GATLARSDLMVITGAGGGIMAAAHEGAGSEHSLG-------FNITLPFEQHANPTVNGTD 160
           G  L   +L + TG G G M    +GA   HS           +T P    A P     +
Sbjct: 168 GYQLGLRELDICTGCGPGAMEGPMKGAAIGHSKQRIKNARYIGLTEPSIIAAEPPNQIVN 227

Query: 161 KLLPFHFFFIRKLFFVKEADGLVLCPGGFGTLDEALEVLTLI---QTGKSPLVPVVLLDS 217
           +L+       R   FV+   G+++ PGG GT +E L +L ++   +  ++P   V+   S
Sbjct: 228 ELVILPDIEKRLEAFVRLGHGIIIFPGGAGTAEELLYILGILLNKENQETPFPLVLTGPS 287

Query: 218 PGGSFWHDCLDFISRQL-----EENRYILPSDLKLVRLVHSADEAVEEINQFYSNYHSSR 272
               ++    +FI+  L     ++ + I+ +  ++ R++    E V+   +   + +  +
Sbjct: 288 ESADYFIKIDEFIAATLGPEAQQKYQIIIDNPAEVARVMKQGMEQVKNHRRTTGDAYQYQ 347

Query: 273 W 273
           W
Sbjct: 348 W 348