Pairwise Alignments

Query, 355 a.a., Protein RecA from Pseudomonas putida KT2440

Subject, 356 a.a., recombinase A from Synechococcus elongatus PCC 7942

 Score =  427 bits (1099), Expect = e-124
 Identities = 218/347 (62%), Positives = 264/347 (76%), Gaps = 2/347 (0%)

Query: 5   KKRALAAALGQIERQFGKGAVMRMGDHERQGIPAISTGSLGLDIALGIGGLPKGRIVEIY 64
           K++AL   L QIER FGKGA+MR+GD  R  +  ISTG+L LD+ALG GGLPKGRI+E+Y
Sbjct: 12  KEKALNLVLSQIERNFGKGAIMRLGDAARLRVETISTGALTLDLALG-GGLPKGRIIEVY 70

Query: 65  GPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQA 124
           GPESSGKTTLTL  IAE QK G   AFVDAEHALDP YA  +GV++D+LL+SQPDTGE A
Sbjct: 71  GPESSGKTTLTLHAIAEVQKQGGIAAFVDAEHALDPVYATSVGVDIDNLLISQPDTGEMA 130

Query: 125 LEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIKNA 184
           LEI D LVRS AVD++++DSVAALVP+AEIEGEMGD  VGLQARLMSQA+RKITGNI  +
Sbjct: 131 LEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDAQVGLQARLMSQAMRKITGNIGKS 190

Query: 185 NCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSETRVK 244
            C VIF+NQ+R KIGV +GSPETTTGG ALKFYASVRLDIRR   +K+G E  G+  +VK
Sbjct: 191 GCTVIFLNQLRQKIGVTYGSPETTTGGQALKFYASVRLDIRRIQTLKKGTEEYGTRAKVK 250

Query: 245 IVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYAYQGNKIGQGKANA 304
           +VKNKV+PPFR AEF IL+GKGI   G ++DL    G++ + GAWY+Y G+ IGQG+ N 
Sbjct: 251 VVKNKVAPPFRIAEFDILFGKGISTLGCLVDLAEETGVILRKGAWYSYNGDNIGQGRDNT 310

Query: 305 AKYLAENPAIGAEIEKQIREKLLKAGAAAEAGKAAAAEADADDMADA 351
             +L E+P   A +E+Q+REK L  GA   A    AA A   +  D+
Sbjct: 311 ITHLEEHPDFRATVEQQVREK-LALGAQVSANTVGAAPAKTAEDTDS 356