Pairwise Alignments

Query, 262 a.a., metallopeptidase, M23B subfamily from Pseudomonas putida KT2440

Subject, 590 a.a., Peptidoglycan-binding LysM from Synechococcus elongatus PCC 7942

 Score =  112 bits (281), Expect = 1e-29
 Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 12/193 (6%)

Query: 82  SSSRTTVVSSPSSS-------SRTTVTRRPVGSTATAPASTSKPATS-APSAPA-PVVAT 132
           SSSR+   + PS++           V   P+GS    P   S   T+ AP  P+      
Sbjct: 398 SSSRSLTPALPSATPFKPQQPEPDKVAVAPLGSENYEPLLASLLKTAVAPELPSLNSDEL 457

Query: 133 VPAAERAVGGWTWPANGVLIGKFASN-GSLNKGIDIAGDLGQPVFAASDGAVVYAGSGLR 191
           +P       G+ WPA G+L   +    G +++GIDIAG +G P+ AA+ G VV AG    
Sbjct: 458 LPGGGDRFAGYIWPARGILSSGYGWRWGRMHRGIDIAGPVGTPILAAAPGVVVTAGWNSG 517

Query: 192 GYGELIIIKHSDTYVSAYGHNRRLLVREGQQVKAGQSIAEMGSTG-TDRVKLHFEIRRQG 250
           GYG L+ I+H +  ++ Y HN R+LVR G++V+ GQ +AEMGSTG +    LHFE+  +G
Sbjct: 518 GYGNLVEIQHPNGSLTLYAHNNRILVRPGERVQQGQIVAEMGSTGRSTGPHLHFEVHPRG 577

Query: 251 K-PVDPLQFLPRR 262
              V+P+ +LP R
Sbjct: 578 NGAVNPIAYLPSR 590



 Score = 37.4 bits (85), Expect = 7e-07
 Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 12/140 (8%)

Query: 9   SSTSSNSARVVDRNNTVPKRPAVTSGQYIVKPGDTLFSIAFRYGWDYKELAARNGIQAPY 68
           ++T+    ++ D     P R   +   + V+PG+TL+SIA  +G    +L   N +    
Sbjct: 119 AATNGVMPQLFDNEAEAPARTLSSQEIHRVQPGETLWSIARAHGLTVAQLLTYNQLTEGT 178

Query: 69  TIRPGQAIRFSSGS------SSRTTVVSSPSSSSRTTVT-----RRPVGSTATAPASTSK 117
           T+R  Q +     +      ++   +V  P       +        P    +  P S S 
Sbjct: 179 TLRVDQVLNLQPKAVEPAPIATAAPLVQDPVQQHLLALAGDSRLPSPAAERSVEPIS-SV 237

Query: 118 PATSAPSAPAPVVATVPAAE 137
           P  + P+ P PV A  P  +
Sbjct: 238 PPQATPTLPRPVTAEAPVIQ 257



 Score = 37.4 bits (85), Expect = 7e-07
 Identities = 22/66 (33%), Positives = 32/66 (48%)

Query: 36  YIVKPGDTLFSIAFRYGWDYKELAARNGIQAPYTIRPGQAIRFSSGSSSRTTVVSSPSSS 95
           Y V+PGD+L  IA R+G D ++L   N +  P  I  GQ +       +R   V++    
Sbjct: 284 YTVQPGDSLSRIATRFGLDLQDLLQVNRLSNPNLIFVGQRLTIPPAGQARLAPVATLPPL 343

Query: 96  SRTTVT 101
            R  VT
Sbjct: 344 LRQQVT 349