Pairwise Alignments

Query, 352 a.a., tRNA pseudouridine synthase D from Pseudomonas putida KT2440

Subject, 352 a.a., tRNA pseudouridine synthase D, TruD from Pseudomonas syringae pv. syringae B728a

 Score =  555 bits (1429), Expect = e-163
 Identities = 272/352 (77%), Positives = 303/352 (86%)

Query: 1   MTELELLGPRASGEPLGTAILKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA 60
           M ELELLGPRA GE LG A+LKA AEDFQVDEVLDIPLSG GEHLWLWVEKR LNTEEAA
Sbjct: 1   MNELELLGPRAYGEALGRAVLKATAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAA 60

Query: 61  RRLARAAGVPVRSISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDASLRVLKQVRHQR 120
           RRLARAAGV +R++SYAGLKDRQALTRQWFS+ LPGKADPDLS A+D +L++LK  RH+R
Sbjct: 61  RRLARAAGVQLRTVSYAGLKDRQALTRQWFSIQLPGKADPDLSAAQDDTLQILKSGRHKR 120

Query: 121 KLQRGAHSANGFTLRLTALAADHQAVDARLEQLRQQGVPNYFGTQRFGHGGGNVHDALDW 180
           KLQRGAH+ANGFTLRLT L AD  A++ RLE + +QG+PNYFG QRFG+ GGN+ +A D+
Sbjct: 121 KLQRGAHAANGFTLRLTQLDADKDALNQRLETIARQGIPNYFGAQRFGYQGGNLGEARDY 180

Query: 181 AARKALPEQRNVRSRLLSAGRSYLFNQLLAARVADGSWARAQVGDLLAFTDSRSFFPAGE 240
           AARKALPEQR VRSRLLS  RSYLFN++LAARVADGSW +AQVGDLLAFTDSRSFFPAG 
Sbjct: 181 AARKALPEQRAVRSRLLSTARSYLFNRVLAARVADGSWQKAQVGDLLAFTDSRSFFPAGV 240

Query: 241 AECADPRLAILDLHPTGPMWGEGASPAGGAPAQLENAIGARQPALCQWLAQAGMDHERRI 300
            EC+DPRLAILDLHPTGP WGEG SPAGGA A LEN +   +  L  WL +AGM+HERRI
Sbjct: 241 DECSDPRLAILDLHPTGPQWGEGPSPAGGATAALENTVADDESVLRDWLVRAGMEHERRI 300

Query: 301 LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVREVVDLVSAGQTDSPCVF 352
           LRLPIG LTWHYPE DILQLEFVLP GCFATV+VRE++DLV  GQTDS CVF
Sbjct: 301 LRLPIGRLTWHYPESDILQLEFVLPPGCFATVLVRELIDLVPVGQTDSSCVF 352