Pairwise Alignments

Query, 1174 a.a., DNA polymerase III, alpha subunit from Pseudomonas putida KT2440

Subject, 447 a.a., DNA polymerase III subunit alpha from Synechococcus elongatus PCC 7942

 Score =  184 bits (468), Expect = 1e-50
 Identities = 123/412 (29%), Positives = 210/412 (50%), Gaps = 25/412 (6%)

Query: 758  FNKSHSAAYGLVSYQTAWLKTHYPAPFMAAVLSADMHNTDKVVVLVEEVRSMKLRLDAPD 817
            FNKSHS AYG V++QTA+LK ++P  +MAA+L+ +  N DKV   +    +M + +  PD
Sbjct: 38   FNKSHSTAYGYVTFQTAYLKANFPVEYMAALLTVNSGNADKVQKYIANCAAMGIEVLPPD 97

Query: 818  VNFSDFKFTVNNDGRIVYGLGAIKGVGEGPVEAIVEARAQGGPFKDLFDFCERIDLKRVN 877
            +N S   FT   D RI++GL AI+ +G G +E+I+ AR  GGPF  L D C+R+D   +N
Sbjct: 98   INRSGVDFTPTGD-RILFGLSAIRNLGLGAIESILAARDVGGPFLSLADLCDRVDTGSLN 156

Query: 878  KRTLDALVRSGALDRLGPHFHDEIKAYHANIDINRATLLSALGEAIKAAEQAAHTADSGH 937
            +R +++L+ +GALD L                 NR  L++ L   I  A   A    SG 
Sbjct: 157  RRAMESLIHAGALDVL-------------ETGANRQQLVADLPLVIDWANSRAKDRASGQ 203

Query: 938  VDLFGSM----FDAADVDVYANHRKVRELTLKERLKGEKDTLGLYLTGHPIDEYETEIRR 993
             +LF  +     +++ +D       V + +  E+LK EK+ LG YL+ HP+   +   R 
Sbjct: 204  GNLFDMLGSNDSNSSPLDTAPKAPAVPDYSPDEKLKLEKELLGFYLSDHPLKVVQEPARL 263

Query: 994  FARQRIVDLKP--SRETQTIAGMIIALRVMKNKKGDKMGFVTLDDRSGRIEASLFADAFM 1051
             A   I DL+    R   +   ++  ++ +  KKGD+M  + ++D SG  EA +F  ++ 
Sbjct: 264  LAPASISDLEDYCDRGLISTIALLTEVKPVVTKKGDRMAILRIEDLSGNTEAVVFPRSYE 323

Query: 1052 AAQSLLQTDAMVVVEGEVSNDDFSGGLRLRVKQVMTMEDARTKLAESLRLKVAHDALKGD 1111
                 ++ DA +++ G+V   D    ++  ++    ++  R  L E L ++ A D ++  
Sbjct: 324  RIGHYIEADARLMLWGKVDRRD--DQVQFIIEDAEPIDHVRLVLVE-LSVEQASDIVQQQ 380

Query: 1112 RLK--WLGELITRHRGACPITLEYTGSDAKAMLQFGEQWAIDPADGLIQALR 1161
            RLK   L +     R   P+         +  ++ G Q+ ++  +  ++AL+
Sbjct: 381  RLKELLLQQKREEERSKVPVVAVIQAGSDRYFVRLGAQFRVEDPEEAVEALQ 432