Pairwise Alignments

Query, 452 a.a., regulatory intramembrane protein RIP zinc protease from Pseudomonas putida KT2440

Subject, 455 a.a., Periplasmic pH-dependent serine endoprotease DegQ from Enterobacter sp. TBS_079

 Score = 46.6 bits (109), Expect = 2e-09
 Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 2/107 (1%)

Query: 228 LAEIDPKGPAAAAGLKTGDKLLALDDLAVTEWQQVVDRV-RARPDAKVVVRVERDGAALE 286
           ++E+ P   +A AG+K+GD +++L+D  ++ + ++  R+    P AKV + + RDG  L+
Sbjct: 294 VSEVLPNSGSAKAGVKSGDVIVSLNDKPLSSFAELRSRIATTEPGAKVKLGLIRDGKPLD 353

Query: 287 LPVTLARKGEGKAVGGYLGAGVKGGEWPANMLREISYG-PLDAVGES 332
           + VTL +     A    +   ++G       L++ + G  +D V +S
Sbjct: 354 VEVTLDKSTSSSASAELIAPALQGATLSDGQLKDGTKGISVDTVEKS 400



 Score = 25.0 bits (53), Expect = 0.005
 Identities = 34/160 (21%), Positives = 74/160 (46%), Gaps = 19/160 (11%)

Query: 136 DSGSLAASAGLTAGQEIVSVDGKPTNGWSAVNLQLVRRLGESGT-LQIGVRDEGASAERQ 194
           +SGS  A AG+ +G  IVS++ KP + ++ +  ++     E G  +++G+  +G   +  
Sbjct: 300 NSGS--AKAGVKSGDVIVSLNDKPLSSFAELRSRIATT--EPGAKVKLGLIRDGKPLD-- 353

Query: 195 LQVKLDSWLKGADEPDPIQSL---------GLRPWRPAITPVLAEIDPKGPAAAAGLKTG 245
           ++V LD     +   + I             L+     I+  +  ++   PAA AGL   
Sbjct: 354 VEVTLDKSTSSSASAELIAPALQGATLSDGQLKDGTKGIS--VDTVEKSSPAAQAGLHQD 411

Query: 246 DKLLALDDLAVTEWQQVVDRVRARPDAKVVVRVERDGAAL 285
           D ++ ++   V    ++   + ++P A + ++V R   ++
Sbjct: 412 DVIIGVNRNRVQSIAELRKVLESKP-AVIALQVMRGNESI 450