Pairwise Alignments

Query, 452 a.a., regulatory intramembrane protein RIP zinc protease from Pseudomonas putida KT2440

Subject, 354 a.a., membrane-associated zinc metalloprotease, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  127 bits (319), Expect = 6e-34
 Identities = 74/230 (32%), Positives = 128/230 (55%), Gaps = 2/230 (0%)

Query: 224 ITPVLAEIDPKGPAAAAGLKTGDKLLALDDLAVTEWQQVVDRVRARPDAKVVVRVERDGA 283
           + P + ++   GPAAAAG+++GD+++A+D +++  W QV D + A   A V + + R+  
Sbjct: 124 VLPEVGKVLEGGPAAAAGVQSGDRIVAIDGVSIERWDQVSDAIAASKGAPVTLSLTRNEG 183

Query: 284 ALELPVTLARKGEGKAVGGYLGAGVKGGEWPANMLREISYGPLDAVGESLSRTWNMSVLT 343
             EL +    +      G    A + G +  +     +   P++A      +TW M  +T
Sbjct: 184 QHELRIVPEHRTRKTIFGDEEDAFLIGIQ-ASGATMTLPQTPVEAAVTGARQTWTMIAMT 242

Query: 344 LESLKKMLFGELSVKNLSGPITIAKVAGASAQ-SGVGDFLNFLAYLSISLGVLNLLPIPV 402
            + + K+    + +  + GPI IA++    A+ SG+   L   A +SI+LG+LNLLPIPV
Sbjct: 243 GKGVVKLFERVVPLDTVGGPIMIAQMVSREAKDSGITGVLALAALISINLGLLNLLPIPV 302

Query: 403 LDGGHLLFYLVEWARGRPLSDRVQGWGVQIGISLVIGVMLLALINDLGRL 452
           LDGGH++F  +E    RP+  +VQ    ++G+ L++G+M LA  ND+ R+
Sbjct: 303 LDGGHIIFLGLEMLFRRPVPQKVQEVTTRMGLVLLLGLMFLATYNDIVRI 352



 Score =  115 bits (288), Expect = 2e-30
 Identities = 65/178 (36%), Positives = 98/178 (55%), Gaps = 4/178 (2%)

Query: 13  LVALGVLVTFHEFGHFWVARRCGVKVLRFSVGFGTPLLRWHDRHGTEFVVAAIPLGGYVK 72
           L+ LG L+ FHE GH+  AR  G+ V  FS+GFG  +  W     T++ ++ IPLGGYV 
Sbjct: 8   LLVLGGLIFFHELGHYLAARVLGIGVHTFSLGFGPRIFGWRSGQ-TDYRLSLIPLGGYVS 66

Query: 73  MLDEREGDVPPALA-GQSFNRKSVRQRIAIVAAGPIANFLLAILFFWVLAML-GTQQIRP 130
           +  E + ++P     GQ F+ +    R+ ++AAGP+ N LLA   +W L  + G   + P
Sbjct: 67  LAGESDDEIPEGFTKGQMFSARPAWHRLIVIAAGPVFNLLLAWFIYWGLTFVHGQFIVLP 126

Query: 131 VIGAVDSGSLAASAGLTAGQEIVSVDGKPTNGWSAVNLQLVRRLGESGTLQIGVRDEG 188
            +G V  G  AA+AG+ +G  IV++DG     W  V+  +    G   TL +  R+EG
Sbjct: 127 EVGKVLEGGPAAAAGVQSGDRIVAIDGVSIERWDQVSDAIAASKGAPVTLSL-TRNEG 183