Pairwise Alignments

Query, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 366 a.a., RND efflux membrane fusion protein from Pseudomonas fluorescens FW300-N2E2

 Score =  540 bits (1390), Expect = e-158
 Identities = 274/366 (74%), Positives = 309/366 (84%)

Query: 1   MLRHALSIALPAAAALLLAACGQEAAPPAAPRPALVVQPQPAEAAADSYPGEVRARFEPE 60
           M R+AL +A+P   A LL+ACG +   P A RPA+VV+PQP+  A DSYPGEVRARFEP+
Sbjct: 1   MFRYALPLAVPVTLAFLLSACGHDEPVPVAVRPAMVVKPQPSVQAMDSYPGEVRARFEPD 60

Query: 61  LAFRIGGKVSKRLVEEGQRVKADQPLAELDPQDVRLQLEANRAQLAAAEANLALVRAERD 120
           LAFRIGGKVS+RLVEEGQRVKA+QPLAELDP+DVRLQLEA RAQ+AAAEANL LVRAERD
Sbjct: 61  LAFRIGGKVSRRLVEEGQRVKANQPLAELDPEDVRLQLEAARAQVAAAEANLNLVRAERD 120

Query: 121 RYQKLLERQMVSHSQYDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAGVIAKR 180
           RY+ L+ERQMVS SQYDNAENLYR+G ARLKQ KAEFDVA NQA Y++LRAPQ GV+A+R
Sbjct: 121 RYKTLMERQMVSRSQYDNAENLYRSGTARLKQIKAEFDVANNQASYSILRAPQDGVVARR 180

Query: 181 QVEVGQVVAAGQTVFTLAADGEREVAIGLPEQQFARFAVGQPVSVELWSHPQARFQGRIR 240
            VEVGQVV+AGQTVFTLA DGEREV I LPEQ F RF +GQPVSVELWS P  RF GRIR
Sbjct: 181 SVEVGQVVSAGQTVFTLATDGEREVLISLPEQGFGRFKIGQPVSVELWSQPDQRFSGRIR 240

Query: 241 ELSPAADPRSRTFAARIAFTTAAVPAELGQSARVFIAKDGLIPLAVPLSAVTAENGQAYV 300
           ELSPAADP+SRTFAAR+AFT   VPAELGQSARVFI     +PL+VPLSA+TAENG  YV
Sbjct: 241 ELSPAADPKSRTFAARVAFTAGNVPAELGQSARVFIQTADKVPLSVPLSALTAENGATYV 300

Query: 301 WRVNKESRLERATVRLGAYGSDSVPVLEGLDPGDWVVAAGGHVLREGQEVRPVDRSNRVV 360
           W VN  + L++  VR+GA+G  +VPVLEGL P DWVVAAG HVL +GQ+VRPVDRSNRVV
Sbjct: 301 WVVNANNTLKKVPVRVGAFGEKTVPVLEGLGPDDWVVAAGVHVLLDGQQVRPVDRSNRVV 360

Query: 361 NLTAKE 366
           NLTAKE
Sbjct: 361 NLTAKE 366