Pairwise Alignments

Query, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 395 a.a., transport transmembrane protein from Sinorhizobium meliloti 1021

 Score =  124 bits (311), Expect = 4e-33
 Identities = 106/388 (27%), Positives = 182/388 (46%), Gaps = 41/388 (10%)

Query: 12  AAAALLLAACGQEAA------PPAAPRPALVVQPQPAEAAADSY--PGEVRARFEPELAF 63
           A AA+LL+A    +A      P     P++VV      A  D     G + A  E  ++ 
Sbjct: 11  ACAAMLLSALVSASAEEAVKSPQKQAPPSIVVTEATERAITDRVIATGSIEAVDEIYVSP 70

Query: 64  RIGGKVSKRL-VEEGQRVKADQPLAELDPQDVRLQLEANRAQLAAAEANLALVRAE---- 118
            + G   + L V+ G RV+    LA L+   + LQ     A LA AEA+LA + A+    
Sbjct: 71  LVDGLAIRSLNVDVGDRVEEGGTLAVLNEDALLLQKSQLEANLAKAEASLAQLHAQLAEV 130

Query: 119 ----------RDRYQKLLERQMVSHSQYDNAENLYRAGLARLKQAK-------------- 154
                      +R  +L +   VS ++ D  + L  AG AR++ A+              
Sbjct: 131 TANSEEATRVAERAVQLSKNGTVSTAEADRLKALAAAGRARVRSAEQSVSVATADIKVVQ 190

Query: 155 AEFDVAGNQAEYAVLRAPQAGVIAKRQVEVGQVVA-AGQTVFTLAADGEREVAIGLPEQQ 213
           A+ D    +     ++AP +GVI+++  +VG + + +G+ +F +  DGE E+   + E  
Sbjct: 191 AQIDDVDLRLARTAVKAPVSGVISRKNAKVGAIASGSGEPLFAIIRDGEIEMWADVAESD 250

Query: 214 FARFAVGQPVSVELWSHPQARFQGRIRELSPAADPRSRTFAARIAFTTAAVPAELGQSAR 273
             + AVGQ  +V+L +      +G+IR ++P  DP++R    RI+ T A+  A  G  A 
Sbjct: 251 VIKLAVGQTATVKL-AGSTTTIEGKIRLIAPTVDPQTRLGTVRISLTDAS-KARAGMYAS 308

Query: 274 VFIAKDGLIPLAVPLSAVTAENGQAYVWRVNKESRLERATVRLGAYGSDSVPVLEGLDPG 333
             I  +    + +P +AVT+E+G++ V +V ++  +    V  G      + +L G+ PG
Sbjct: 309 AVIVAEQKETVVLPQTAVTSEDGKSIVRKV-EDGVVRLVPVETGIQDGQFIEILSGIRPG 367

Query: 334 DWVVAAGGHVLREGQEVRPVDRSNRVVN 361
           +  VA  G  +R+G  + PV+ +    N
Sbjct: 368 EQAVAKAGAYVRDGDRINPVESAEPATN 395