Pairwise Alignments

Query, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 369 a.a., Multidrug resistance protein MdtA from Enterobacter sp. TBS_079

 Score =  179 bits (455), Expect = 8e-50
 Identities = 125/357 (35%), Positives = 185/357 (51%), Gaps = 8/357 (2%)

Query: 1   MLR-HALSIALPAAAALLLAACGQEAAPPAAPRPALVVQPQ--PAEAAADSYPGEVRARF 57
           MLR H+  +A+      L+A     A+     +P LV      PA   + ++ G V AR 
Sbjct: 1   MLRLHSARLAVCLLPFALVACGDNHASDDPRTQPPLVRSASVIPANETSRAFTGVVVART 60

Query: 58  EPELAFRIGGKVSKRLVEEGQRVKADQPLAELDPQDVRLQLEANRAQLAAAEANLALVRA 117
           + +L FR+ GK+ +RLV+ GQ VK  QPL  LDP D++LQ +A +  + AA+A      +
Sbjct: 61  QSDLGFRVQGKILERLVDTGQTVKQGQPLMRLDPVDLKLQAQAQQRAVDAAQARARKASS 120

Query: 118 ERDRYQKLLERQMVSHSQYDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAGVI 177
           +  RY+ L+    VS S+YD  +    +  A L  A+A+  VA N   YAVL A   GV+
Sbjct: 121 DEARYRGLVASGAVSASEYDQIKAAADSARAELSAARAQAGVAQNATGYAVLLADSDGVV 180

Query: 178 AKRQVEVGQVVAAGQTVFTLAADGEREVAIGLPEQQFARFAVGQPVSVELWSHPQARFQG 237
            +   E GQVV+AGQ V  LA  G+RE  + LPE    R AVG      L+ + +     
Sbjct: 181 METLAEPGQVVSAGQAVIRLARAGQREALVQLPET--LRPAVGSTALATLYGNEKQPVSA 238

Query: 238 RIRELSPAADPRSRTFAARIAFTTAAVPAELGQSARVFI--AKDGLIPLAVPLSAVTAEN 295
           ++R LS +AD  +RTF AR     A   A LG +  + I   K     + VPL+++    
Sbjct: 239 KLRLLSDSADATTRTFEARYVLDGALANAPLGATVTLSIEHGKGDSRVMQVPLASLYDAG 298

Query: 296 GQAYVWRVNKE-SRLERATVRLGAYGSDSVPVLEGLDPGDWVVAAGGHVLREGQEVR 351
               VWR++ + +++    VR+ + G D   V  G+ PG+ +VA G H L EG+ VR
Sbjct: 299 KGPGVWRISAQPTKVVWQPVRVLSVGDDIARVTGGVQPGEKIVALGVHFLHEGEAVR 355