Pairwise Alignments

Query, 335 a.a., Response regulator/GGDEF domain protein from Pseudomonas putida KT2440

Subject, 318 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  140 bits (352), Expect = 6e-38
 Identities = 79/179 (44%), Positives = 113/179 (63%), Gaps = 4/179 (2%)

Query: 154 VSQQQLLDSNLMLQRLMNSDGLTGLSNRRHFDEYLELEWRRAMREQQQLSLLMIDVDYFK 213
           V+++QL  +N  LQRL ++D LTGL NR H++E L L++ R  R   Q +L+M D+D+FK
Sbjct: 139 VNRRQLQAANAELQRLSSTDRLTGLYNRGHWEEMLRLDYARHRRYDSQAALVMFDIDHFK 198

Query: 214 VYNDSFGHLAGDEALRQVAEAIRSSCSRPTDLPARYGGEEFALVLPNTSPGGARLVAEKL 273
             NDS+GH  GD  ++QVA+ IR +  R +D+  RYGGEEF ++LP+T   GA + AE+L
Sbjct: 199 AINDSYGHQVGDSVIQQVADLIRENL-RDSDVAGRYGGEEFVVLLPDTDKQGALIFAERL 257

Query: 274 RQTVLGLGIPHTAPTADTFLTVSIGLATQTPAIGSHCRQLISAADKGLYLAKNGGRNQV 332
           RQ V    + H         T+S+G+A  +    SH  QLI  AD  LY++K  GRN+V
Sbjct: 258 RQAVEAREVRHEQYRIR--FTISLGVADLSMPTTSHA-QLIEWADSALYVSKACGRNRV 313