Pairwise Alignments
Query, 762 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440
Subject, 2408 a.a., Chemotaxis protein histidine kinase and related kinases from Pseudomonas stutzeri RCH2
Score = 337 bits (864), Expect = 4e-96
Identities = 255/805 (31%), Positives = 415/805 (51%), Gaps = 64/805 (7%)
Query: 4 EQMRDASLLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIVGVD 63
+Q +A +L++F EA+ + + + L + A L +R H+LKG AR+ G
Sbjct: 1613 QQSAEAEILDIFVEEADDLLEEMESALGRWDAGREDAAPLADMLRVLHTLKGGARLAGQT 1672
Query: 64 AGVSVAHVMEDCLVAAQE------GRLRLTAEH-IDALLQGTDLLM-RIATPGDA---GA 112
++AH +E L AQ+ L L + DALL+ + L +A+ G+ +
Sbjct: 1673 DLGNMAHDLEQMLGEAQQQGAPWPDSLFLDVQQGYDALLKDVEQLRANLASDGETRSDSS 1732
Query: 113 QATLPVFLAQMASLLDPGASAMPVVPPAASVPPLATLPPAPMVMPAE--PPEPEPEPALR 170
+A+ P A L+P + P++ V A+ PAP PA+ P + A +
Sbjct: 1733 EASQPE-----AQDLEPQLPSEPLMLAQPIVA--ASTQPAPSSSPAKVLPFIRRAQLAAQ 1785
Query: 171 RKAGKRAGEGAERVLRVTADRLNSLLDLSSKSLVETQRLKPYL-----------ATLQR- 218
A +RA + +++V A+ L L++L+ ++ + R++ + AT++R
Sbjct: 1786 EAAARRA---PQELVKVPAELLEGLVNLAGETSIFRGRVEQQVSDVGFTLGEMEATIERV 1842
Query: 219 ---LKRMHGQGM-QALDGLRMQLEDTG-------------QGNEVLEALAQTQRLLAETQ 261
L+R+ + Q L + + E G Q ++ AL ++ L + +
Sbjct: 1843 RDQLRRLDTETQAQILSRYQAEAERAGYDDFDPLEMDRHSQLQQLSRALFESASDLLDLK 1902
Query: 262 RILQQQAADLDEFGWQASQRAQLLYDTALACRMRPFADVLTGQSRMVRDLGRSLGKPVRL 321
L + D + Q ++ L + + RM PF ++ R+VR + LGK V
Sbjct: 1903 ETLAARNRDAETLLLQQARVNTELQEGLMRTRMVPFERLVPRLRRIVRQVAGELGKQVEF 1962
Query: 322 VVEGEKTQVDRDVLEKLEAPLTHLLRNAVDHGIELPERRLLAGKPDEGVIRLRASHQAGM 381
+V ++DR VLE++ APL H+LRNAVDHGIE ERR GKP++G IRL + + G
Sbjct: 1963 MVGNATGEMDRSVLERIVAPLEHMLRNAVDHGIESVERRRAVGKPEQGTIRLDLAREGGD 2022
Query: 382 LSLELIDDGAGIDLERLRSSIVERALSPADTVARMSEAELLTFLFLPGFSLRDKVTEVSG 441
+ L L DDGAGI+L+ +R +ER L AD + +SE E+L F+ GFS ++VT++SG
Sbjct: 2023 IVLTLADDGAGINLDAVRRKAIERGLMVAD--SDLSEHEILQFILEAGFSTAERVTQISG 2080
Query: 442 RGVGLDAVQHLIRELRGSIELTQVAGQGCRFHLQVPLTLSVVRSLVVEVGGEAYAFPLAH 501
RGVG+D V +++L GS+ + GQG RF +++P T+SV R+L+V G + YA PL
Sbjct: 2081 RGVGMDVVHSEVKQLGGSMTIESTLGQGTRFLIRLPFTVSVNRALMVYSGEDLYAIPLNT 2140
Query: 502 IERTLEVTAEQIVQI--EGRQHFWHEGRHIGLVAASQLLN---RPAGQSDEASLRVVVIR 556
IE + V+ ++ F + G+ L LLN +P L V+++R
Sbjct: 2141 IEGIVRVSPYELEAYYQPDAPRFEYAGQAYELRYLGDLLNNGQKPKLVGQSLPLPVILVR 2200
Query: 557 EREQLYGVAVERLVGERVLVVMPLDPRLGKVQDISSGALLDDGSVVLIVDVEDLLRSLEK 616
+E V V+ L G R +VV L P+ V IS +L DG VV+I+D+ +R L
Sbjct: 2201 SKEHSVAVQVDSLAGSREIVVKSLGPQFAGVHGISGATILGDGRVVVILDLLATIRVLHA 2260
Query: 617 L-LSTGSLERIERGSSGARGVVRKR---ILVVDDSLTVRELQRKLLGNRGYDVAVAVDGM 672
L+ R+ + V +R ++VVDDS+TVR++ +LL G +V A DG+
Sbjct: 2261 YQLTQLQQPRLFDQTHEPVEVESERPTLVMVVDDSVTVRKVTSRLLERNGMNVLTAKDGV 2320
Query: 673 DGWNALRSEDFDLLITDIDMPRMDGIELVTLVRRDQRLQSLPVMVVSYKDREEDRRRGLD 732
D L+ D+++ DI+MPRMDG E+ TLVR D+RL+ LP+++++ + E+ R R L
Sbjct: 2321 DAITQLQERKPDIMLLDIEMPRMDGFEVATLVRHDERLKDLPIVMITSRTGEKHRDRALS 2380
Query: 733 AGADYYLAKASFHDDALLDAVVELI 757
G + YL K + + LL+A+ L+
Sbjct: 2381 IGVNEYLGK-PYQESVLLEAIQRLV 2404
Score = 42.4 bits (98), Expect = 3e-07
Identities = 70/272 (25%), Positives = 111/272 (40%), Gaps = 28/272 (10%)
Query: 8 DASLLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIVGVDAGVS 67
D LLE+F EAEA L + L + Q +A RA H+LKG+A + G+
Sbjct: 901 DPQLLEIFRNEAEAHLTTLVSFLADCAQRLPQP-VTDALQRALHTLKGSAHMAGILPVAE 959
Query: 68 VAHVMEDCLVAAQEGRLRLTAEHIDALLQGTDLLMRIA---------TPGDAGAQATLPV 118
+A +E + +++ + LL +LL+R P + A+ L V
Sbjct: 960 IATPLEKMAKEFKTNLIQMDLAEAE-LLHEAELLLRKGLTNLDHEPLAPIEGAAEFLLKV 1018
Query: 119 FLAQMASLLDPGASAMPVVPPAASVPPLATLPPAPM--VMPAE---------PPEPEPEP 167
A L++ GA +A M ++ AE P E +
Sbjct: 1019 HTLHQARLVEAGARQHNDAGETRDPNMIALFLSEGMDILLDAEDLLRSWREHPAERQELS 1078
Query: 168 ALRRKAGKRAGEGAERVLRVTADRLNSLLDLSSKSLVETQRLKPYLATLQRLKRMHGQGM 227
AL ++ G+GA+ + L +L L ++VE R LA +R QG
Sbjct: 1079 ALLQEL-TTLGQGAKMADLPQMEALCQVL-LRLYAVVEEGR----LAVSERFFDDVEQGH 1132
Query: 228 QALDGLRMQLEDTGQGNEVLEALAQTQRLLAE 259
+AL G+ Q+ Q +E E +A+ + LLAE
Sbjct: 1133 EALVGMMDQVAAALQVSEQSELVARLEALLAE 1164
Score = 35.8 bits (81), Expect = 3e-05
Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 21/163 (12%)
Query: 4 EQMRDASLLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIVGVD 63
E+ D LLE+F EA + + L + + L RA H+LKG+ R+V
Sbjct: 741 EEPVDEDLLEVFIEEAAEVLETIGEQLPRWFADTEDKEALGEVRRAFHTLKGSGRMVRAL 800
Query: 64 AGVSVAHVMEDCLVAAQEGRLRLTAEHIDALLQGTDLLMRIATPGDAGAQATLPVFLAQM 123
+A +E+ L +D +Q TD + ++ T G A +P + +
Sbjct: 801 IIGELAWSIENLLNRV-----------LDRSIQVTDPVKQVVT----GVIALMPALVDEF 845
Query: 124 ASLLDPGASAMPVVPPAASVPPLATLPPA----PMVMPAEPPE 162
A+ + + AA+ LA PA P VMPA P E
Sbjct: 846 AAKAQRQRDDVDQL--AAAAHALAKGQPAMLSQPAVMPATPAE 886
Score = 34.3 bits (77), Expect = 8e-05
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 8 DASLLELFSLEAEAQTQVLNAGLMALER---NPTQADQLEACMRAAHSLKGAARIVGVDA 64
D ++E+F EA ++ + AL+R +P L A +R H+LKG AR+ +
Sbjct: 1235 DHEMVEIFLDEA---VDLMESAGHALDRWLADPANQMALSALLRDLHTLKGGARMAAIRP 1291
Query: 65 GVSVAHVMEDCLVAAQEGRLRLTAEHIDALLQ 96
+AH +E +GR + ++ + LLQ
Sbjct: 1292 IGDLAHELESLYEGLSDGRY-VHSQELATLLQ 1322
Score = 33.9 bits (76), Expect = 1e-04
Identities = 23/83 (27%), Positives = 36/83 (43%)
Query: 7 RDASLLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIVGVDAGV 66
RD L+E+F E + GL + + +LEA R H+LKG AR+ +
Sbjct: 1469 RDPELVEIFLEEGFDLIESAAGGLQRWMADVDNSFELEALQRDLHTLKGGARMADIREIG 1528
Query: 67 SVAHVMEDCLVAAQEGRLRLTAE 89
++H +E G R + E
Sbjct: 1529 DLSHELEFLYEGLCAGNYRASPE 1551