Pairwise Alignments

Query, 762 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  227 bits (578), Expect = 2e-63
 Identities = 147/513 (28%), Positives = 246/513 (47%), Gaps = 53/513 (10%)

Query: 102 MRIATPGDAGAQATLPVFLAQMASLLDPGASAMPVVPPAASVPPLATLPPAPMVMPAEPP 161
           + +AT   A +  +     +  AS      +A PV  PAA+ P +A   PA    PA   
Sbjct: 316 LEMATRPVASSPVSSDAKASAEASAPSTKPAAKPVAKPAAAKPAVAKEEPAKAPAPAAVK 375

Query: 162 EPEPEPALRRKAGKRAGEGAERVLRVTADRLNSLLDLSSKSLVETQRLKPYLATLQRLKR 221
           + +    +    G +  +  E  +RV    L++++++  + ++   RL            
Sbjct: 376 DSDESREVAAAGGAKKAQ-TESTVRVDTSTLDTIMNMVGELVLVRNRL------------ 422

Query: 222 MHGQGMQALDGLRMQLEDTGQGNEVLEALAQTQRLLAETQRILQQQAADLDEFGWQASQR 281
                        + L       E+ +A+A    + A+ Q                    
Sbjct: 423 -------------LSLGLNSNDEEMSKAVANLDVVTADLQ-------------------- 449

Query: 282 AQLLYDTALACRMRPFADVLTGQSRMVRDLGRSLGKPVRLVVEGEKTQVDRDVLEKLEAP 341
                   +  RM+P   V     R+VRDL RSL K + L + GE+T +D++++E L  P
Sbjct: 450 -----GAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADP 504

Query: 342 LTHLLRNAVDHGIELPERRLLAGKPDEGVIRLRASHQAGMLSLELIDDGAGIDLERLRSS 401
           L HL+RN+VDHGIE+P+ R   GK   G + L AS +   + L ++DDGAG+D ++LR  
Sbjct: 505 LIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGI 564

Query: 402 IVERALSPADTVARMSEAELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHLIRELRGSIE 461
            V+R +   D   R++  E    +F+PGFS ++K+T++SGRGVG+D V+  I  L GSI+
Sbjct: 565 AVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSID 624

Query: 462 LTQVAGQGCRFHLQVPLTLSVVRSLVVEVGGEAYAFPLAHIERTLEVTAEQIVQIEGRQH 521
           +    G+G +  ++VPLTL+++ +L+V V G  +A PLA +     +   +   ++G+  
Sbjct: 625 IDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQLT 684

Query: 522 FWHEGRHIGLVAASQLLNRPAG--QSDEASLRVVVIREREQLYGVAVERLVGERVLVVMP 579
                + I L      L    G  Q  +    VV+++   Q  G+ V+ L+G+  +V+ P
Sbjct: 685 IIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVIKP 744

Query: 580 LDPRLGKVQDISSGALLDDGSVVLIVDVEDLLR 612
           LD  L     +S   +  DG + LI+DV DLL+
Sbjct: 745 LDKLLQGTPGMSGATITSDGHIALILDVPDLLK 777



 Score = 47.0 bits (110), Expect = 4e-09
 Identities = 26/92 (28%), Positives = 45/92 (48%)

Query: 8  DASLLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIVGVDAGVS 67
          D  +L+ F +EA    ++L+  L+ LE NP   D L A  R  H++KG A  + +   V 
Sbjct: 6  DEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVE 65

Query: 68 VAHVMEDCLVAAQEGRLRLTAEHIDALLQGTD 99
            H  E+     + G+  ++   +D +L+  D
Sbjct: 66 TCHGAENVFDILRNGQRHVSPSLMDTMLKALD 97