Pairwise Alignments

Query, 762 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 862 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

 Score =  214 bits (544), Expect = 2e-59
 Identities = 158/535 (29%), Positives = 256/535 (47%), Gaps = 63/535 (11%)

Query: 82  GRLRLTAEHIDALLQ--GTDLLMRIATPGDAGAQATLPVFLAQMASLLDPGASAMPVVPP 139
           GRL   A  +D +L+  G D          AG   +    LA +A+L +   +       
Sbjct: 384 GRLASVARTVDNVLRAAGHDTAPWTGATAAAGQSGSAAPMLAFLAALFETSETTNETASE 443

Query: 140 AASVPPLATLPPAPMVMPAEPPEPEPEPALRRKAGKRAGEGAERVLRVTADRLNSLLDLS 199
            AS    A             P PE   AL      +    A RVL+V   ++++L+ L 
Sbjct: 444 TASETVGA-------------PPPEGGEALGPVLADQ--RPANRVLKVDQAKIDTLMALI 488

Query: 200 SKSLVETQRLKPYLATLQRLKRMHGQGMQALDGLRMQLEDTGQGNEVLEALAQTQRLLAE 259
            + +V    L P+LA  +R + +HG                  G E+ +  A   RL  E
Sbjct: 489 GELVVSKNSL-PFLA--RRAEEVHGS--------------REMGREIKDTFAVVDRLAQE 531

Query: 260 TQRILQQQAADLDEFGWQASQRAQLLYDTALACRMRPFADVLTGQSRMVRDLGRSLGKPV 319
            Q  +                         +A RM P ++V     R+VRD+ R LGK +
Sbjct: 532 MQAAI-------------------------MAVRMLPVSEVFERFPRLVRDIARKLGKHI 566

Query: 320 RLVVEGEKTQVDRDVLEKLEAPLTHLLRNAVDHGIELPERRLLAGKPDEGVIRLRASHQA 379
            LV+EGE T  D+ ++E L  PL H++RN++DHGIE PE R  AGKP    + ++A H +
Sbjct: 567 DLVIEGEDTAADKTIVEMLGDPLLHIIRNSLDHGIESPEEREAAGKPPTARVLVKAFHDS 626

Query: 380 GMLSLELIDDGAGIDLERLRSSIVERALSPADTVARMSEAELLTFLFLPGFSLRDKVTEV 439
             + +E+ DDG GID  ++R++ V + +  A+  AR+S+ E +  +FLPGFS   +V+++
Sbjct: 627 DQVVIEVSDDGRGIDPVKIRAAAVAKGVIEAERAARLSDQEAVNLVFLPGFSTAGQVSDL 686

Query: 440 SGRGVGLDAVQHLIRELRGSIELTQVAGQGCRFHLQVPLTLSVVRSLVVEV-GGEAYAFP 498
           SGRGVG+D V   + +  G + L+   G G    L +PL+++V R ++VE  GG  +  P
Sbjct: 687 SGRGVGMDVVVSTMDKANGVVSLSSTPGLGTTVRLSLPLSMAVTRVMMVEAGGGMLFGIP 746

Query: 499 LAHIERTLEVTAEQIVQIEGRQHFWHEGRHIGLVAASQLLN--RPAGQSDEASL-RVVVI 555
           + HI +T+ +  + + +I+  + F      + LV    LL    P    DE+    V+V+
Sbjct: 747 MDHIAQTVRIPRKAVRRIKQSEAFVLRDAIVPLVRLDTLLGLAPPVWFGDESQEDAVLVV 806

Query: 556 REREQLYGVAVERLVGERVLVVMPLDPRLGKVQDISSGALLDDGSVVLIVDVEDL 610
           R    L G+ V+       +++ P D  L  +   S  ALL DG V+L++++++L
Sbjct: 807 RVGNALTGLVVDHFREGMDIILKPFDGILAGLPGYSGTALLGDGRVLLVLNLKEL 861



 Score = 60.8 bits (146), Expect = 3e-13
 Identities = 49/157 (31%), Positives = 69/157 (43%), Gaps = 16/157 (10%)

Query: 11  LLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIVGVDAGVSVAH 70
           LL  F  EA    Q   +GL+ALE+ P     L    R+ H+LKG+  +    A   + H
Sbjct: 5   LLLRFLSEARDLLQTAASGLLALEKTPGDDAALNEVFRSVHTLKGSVGLFDYPAFTKLVH 64

Query: 71  VMEDCLVAAQEGRLRLTAEHIDALLQGTDLLMRIATPGDAGAQATLPVFLAQMASLLDPG 130
             ED L A + G++ LT+E +D LL   D L ++    DA           + + LL  G
Sbjct: 65  AGEDVLSAVRAGQVALTSELVDLLL---DTLDQVGAWVDA----------IERSGLLPDG 111

Query: 131 ASAMPVVPPAASVPPLATLPPAPMVMPAEPPEPEPEP 167
           A  + +   A +    ATLP      P   PEP   P
Sbjct: 112 AEGLSL---ALTTSLRATLPREHGAEPTSAPEPTEAP 145