Pairwise Alignments

Query, 168 a.a., CheW domain protein from Pseudomonas putida KT2440

Subject, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

 Score = 42.7 bits (99), Expect = 1e-08
 Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 14/136 (10%)

Query: 13  NTEGALYLQFRIRAQRFALSVHEVIEVLP-RQPLKPIAQAPAWVAGILAHRGQLVPVIDL 71
           NT+  L + F++  + F +S+H V E++   + +  + +   ++ G++  RG ++P++D+
Sbjct: 366 NTDMQLVI-FKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDM 424

Query: 72  AALSFGQPAVQRTSTRLVLVHYRGGLQLGLILEQATETLRCQPDEFQPYGVDTGDAPYLG 131
               F  P + R   + +LV     +  G I++  +E LR    + +       DAP L 
Sbjct: 425 RK-RFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLE-------DAPVL- 475

Query: 132 PVRQDAQGLLQRIEVN 147
               + Q  L R  VN
Sbjct: 476 ---SEEQAQLMRQMVN 488



 Score = 40.0 bits (92), Expect = 6e-08
 Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 1/101 (0%)

Query: 19  YLQFRIRAQRFALSVHEVIEVLPRQPLKPIAQAPAWVAGILAHRGQLVPVIDLAALSFGQ 78
           Y+ F +  + FAL + EV E++       +   P+++ G+   RGQ++PV+ L  L    
Sbjct: 20  YVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCMD 79

Query: 79  PAVQRTSTRLVLVHYRGGLQLGLILEQATETLRCQPDEFQP 119
                 +TR++++   G  ++G  +++        P+  +P
Sbjct: 80  RTSATEATRVIVITI-GKTKIGFTVDRVVNVATPDPEMIKP 119