Pairwise Alignments

Query, 303 a.a., polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 423 a.a., spermidine/putrescine transport system permease protein PotB from Phaeobacter inhibens DSM 17395

 Score =  121 bits (303), Expect = 3e-32
 Identities = 87/262 (33%), Positives = 134/262 (51%), Gaps = 18/262 (6%)

Query: 43  WQGFYTFDDFTMAVTPDLTLGNFAALFNPSNFDI----ILRTLGMAVAVSLASAVLAFPI 98
           + G YT   F  A   D   G   A   P N  I     LRTL M++A++++  VL +P+
Sbjct: 167 YSGAYTNGYFLNAA--DFQKGAEGAELRPENERIYGTLFLRTLIMSLAITVSCIVLGYPV 224

Query: 99  AYYMARYTSGKTKAFFYIAVMMPMWASYIVKTYAWTLLLAKGGVAQWFVQQLHLDGLLQA 158
           A+ +A   S +T     I V++P W S +V+T AW ++L + GV    +  L L      
Sbjct: 225 AWILANLPS-RTANLLMILVLLPFWTSLLVRTSAWKVMLQQQGVINDTLVWLGL------ 277

Query: 159 VLAVPGVGGSTLSTSHLGRFLVFVYIWLPFMILPIQASLERLPPSLLQASADLGARPGQT 218
              V       +  +  G  +   +I LPFMILP+ + ++ + PS L+A+  LGA     
Sbjct: 278 ---VADDARLVMINNQFGTIVAMTHILLPFMILPMYSVMQTINPSYLRAAKSLGATNWTA 334

Query: 219 FVQVILPLSIPGIAAGSIFTFSLTLGDFIVPQLV-GPPGYFIGSMVYAQQGAIGNMPMAA 277
           F +V  P S+PGI AGSI  F L +G +I P+LV G  G FI + +        N  +AA
Sbjct: 335 FWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTKGVFISNRIAFHISQSLNWGLAA 394

Query: 278 AF-TLVPIVLIAVYLAIVKRLG 298
           A  +++ +V++A+Y A  K +G
Sbjct: 395 ALGSILLVVVLALYWAYDKIVG 416