Pairwise Alignments

Query, 303 a.a., polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  123 bits (308), Expect = 6e-33
 Identities = 70/242 (28%), Positives = 136/242 (56%), Gaps = 14/242 (5%)

Query: 60  LTLGNFAALFN-PSNFDIILRTLGMAVAVSLASAVLAFPIAYYMARYTSGKTKAFFYIAV 118
           L LGN+  L + P  +   L +L MA+  ++   ++ +P+AY +AR    + +    + V
Sbjct: 65  LHLGNYLMLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIAR-APARWQTVLLLLV 123

Query: 119 MMPMWASYIVKTYAWTLLLAKGGVAQWFVQQLHLDGLLQAVLAVPGVGGSTLSTSHLGRF 178
           M+P W S++++ YAW  +L+  G+    +  L   G++   L +          +++  +
Sbjct: 124 MLPSWTSFLIRVYAWMGILSNTGIINNSLMWL---GIISEPLQI--------LNTNIAVY 172

Query: 179 LVFVYIWLPFMILPIQASLERLPPSLLQASADLGARPGQTFVQVILPLSIPGIAAGSIFT 238
           +  +Y +LPFMILP+ A+L +L  SL++A++DLG+    TF ++  PLS  G+ AGS+  
Sbjct: 173 IGIIYAYLPFMILPLYATLVKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLV 232

Query: 239 FSLTLGDFIVPQLV-GPPGYFIGSMVYAQQGAIGNMPMAAAFTLVPIVLIAVYLAIVKRL 297
           F   +G+F++P+L+ GP    IG +++ +     + P+A++  +V +VL+ + + +  R 
Sbjct: 233 FIPAVGEFVIPELLGGPDSLMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRY 292

Query: 298 GA 299
            A
Sbjct: 293 QA 294