Pairwise Alignments

Query, 268 a.a., polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

 Score =  135 bits (339), Expect = 1e-36
 Identities = 73/240 (30%), Positives = 131/240 (54%), Gaps = 2/240 (0%)

Query: 19  LFLHFPILIIFLYAFNTEDAAFSFPPKGFTLKWIDVAFTRPDVLEAIKLSLQVACLATLI 78
           LFL+ PI+++   +FN  +  F     GFT KW         +++A   S+ VA  +   
Sbjct: 15  LFLYLPIIVLIANSFN--ENKFGIKWGGFTTKWYHALMNNDSLMQAAWHSINVAVFSATA 72

Query: 79  ALVLGTLASAALYRRSFFGKESISLVLILPIALPGIITGIALLSAFKTLGIEPGVFTIVV 138
           A ++G+L + AL+R  F GK+ +S +L + +  P I+  I+LL+ F  +G + G FT+++
Sbjct: 73  ATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFTLLI 132

Query: 139 GHATFCVVIVYNNVIARLRRTSQSLIEASMDLGADGWQTFRYIVLPNLGSALLAGGMLAF 198
            H TFC+  V   V  RL      ++EA+ DLGA  W   + I+LP    A+ AG +L+F
Sbjct: 133 AHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWLLSF 192

Query: 199 ALSFDEIIVTTFTAGHERTLPIWLLNQLSRPRDVPVTNVVAMLVMLVTMLPILGAYYLTR 258
            LS D++I+++F  G    +    +  + +    P  N +A ++++V+++ ++ +  L R
Sbjct: 193 TLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVVASQLLAR 252