Pairwise Alignments

Query, 298 a.a., Tyrosine recombinase XerD from Pseudomonas putida KT2440

Subject, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

 Score =  164 bits (416), Expect = 2e-45
 Identities = 108/300 (36%), Positives = 168/300 (56%), Gaps = 13/300 (4%)

Query: 3   ALDHPLIDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQE----HSVSLPDAG-RDLIL 57
           AL  PL ++F   L  EKGLS  T+ +Y+  L     +L +    H   L  A  R L++
Sbjct: 12  ALAQPL-ERFYAYLHTEKGLSLYTQRNYKQQLETMTQYLVQVGLTHWTQLDSAWVRQLVM 70

Query: 58  DHLAWRLDQGYKPRSTARFLSGLRGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEA 117
                   QG K  S A  LS LR F  +L+    +  +P   V  P+  + LPK+L   
Sbjct: 71  QGKR----QGMKASSIATRLSSLRSFLDFLILRGELQANPAKGVSAPRKQRTLPKNLDVD 126

Query: 118 DVEALLQAPDLGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVMGKGSKE 177
           ++  LL+  D  + +  RDRA++E++Y  GLR+ ELVS+ +  VNL +G +RV+GKG+KE
Sbjct: 127 EMAQLLEVTD-DDPLSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIRVIGKGNKE 185

Query: 178 RLVPMGEEAVVWLERYQRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGI 237
           R V    +A  W+ ++ +  R++L +   +  LF S+ G +++ ++   R+    +   +
Sbjct: 186 RKVWFAGQAQEWVGKWLKL-RSQLADSAET-ALFVSKLGTRISHRSVQKRMAEWGQKQAV 243

Query: 238 DKPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPR 297
              +SPH LRH+FATH+L    +LR VQ LLGH +++TTQIYTH+    L Q++ Q HPR
Sbjct: 244 ASHISPHKLRHSFATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQHLAQVYDQAHPR 303