Pairwise Alignments

Query, 298 a.a., Tyrosine recombinase XerD from Pseudomonas putida KT2440

Subject, 311 a.a., putative tyrosine recombinase XerC from Phaeobacter inhibens DSM 17395

 Score =  141 bits (356), Expect = 2e-38
 Identities = 98/298 (32%), Positives = 145/298 (48%), Gaps = 13/298 (4%)

Query: 9   IDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQEHSVSLPDAGRDLIL---DHLAWRLD 65
           ++Q+L  L   +G ++NT  +YR D+  F  ++  H       G    +   D  AW   
Sbjct: 17  LEQWLAGLAALQGAAENTITAYRGDVVEFLAFMTHHFGGPQGLGALAEISTGDMRAWMAA 76

Query: 66  Q---GYKPRSTARFLSGLRGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEADVEAL 122
               G   RS AR LS ++ F+ +L   +       L    P+  K LP+ L+E    A+
Sbjct: 77  TRATGTGARSLARKLSAVKSFYTWLAERQGFEPTAVLSARSPKFQKKLPRPLAEDAARAV 136

Query: 123 LQAPDLGEA---IGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVMGKGSKERL 179
           ++  +       +  RD A++ +LY CGLR++E + LT     L   VLR+ GKG KER+
Sbjct: 137 IETVEFQSTTDWVAARDVAVVTLLYGCGLRISEALGLTGADAPL-PAVLRITGKGGKERI 195

Query: 180 VPMGEEAVVWLERYQRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGIDK 239
           VP+   A   ++RY R          P   LF   RG  +  +     +       G+  
Sbjct: 196 VPVLHAARAAVDRYLRLCPHPQERAAP---LFRGVRGGALNARLIRSAMAQARAQLGLPA 252

Query: 240 PLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPR 297
             +PH LRH+FATHLL  G DLR +Q LLGH+ LSTTQ YT V  A L  ++ + HP+
Sbjct: 253 SATPHALRHSFATHLLEAGGDLRAIQELLGHASLSTTQAYTAVDTAHLMDVYNRAHPK 310