Pairwise Alignments

Query, 178 a.a., Ribosome maturation factor RimM from Pseudomonas putida KT2440

Subject, 167 a.a., putative 16S rRNA-processing protein RimM from Phaeobacter inhibens DSM 17395

 Score = 83.6 bits (205), Expect = 2e-21
 Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 5/157 (3%)

Query: 12  IVVGKIFSVHGVRGEVKVYSFTDPIENLLDYPRWTLRHEGKVKQVELVSGRGSQKGLVVK 71
           I VG I   +GVRGEV++ SF    E++ DY   +     +   + LV  R  + G   +
Sbjct: 5   ICVGAISGSYGVRGEVRLKSFCAMPEDIEDYSPLSTEDGSQTYTITLV--RAIKNGFTAR 62

Query: 72  LKGLDDRDEARLLSGYEICIPRSLLPNLAADEYYWYQLVGLKVINQDEQLFGKVDHLLET 131
           + G++ +++A  L G  +  PR  LPNL  DEYY   L+GL+V +    L G V  +   
Sbjct: 63  IGGIETKEQADALKGVRLFAPRERLPNLPDDEYYHTDLMGLEVYDTGGTLLGSVKSVQNH 122

Query: 132 GANDVMVVKPCAGSLDDRERLLPYTEQCVLAIDLEAG 168
           GA+D++ +   A   + +  LLP+T   V  +DL +G
Sbjct: 123 GASDLLEI---AIPAESKTVLLPFTLAAVPTVDLASG 156