Pairwise Alignments

Query, 174 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 198 a.a., carnitine operon protein CaiE from Klebsiella michiganensis M5al

 Score =  110 bits (274), Expect = 2e-29
 Identities = 60/154 (38%), Positives = 90/154 (58%)

Query: 16  SWAAPNATLIGNVRLQAHSSVWFGAVLRGDNELIDIGEGSNVQDGTVMHTDMGSPLTLGK 75
           S+  P A LIG+V L     V   A LRGD   I + +G+N+QD  VMH   G    + +
Sbjct: 17  SYVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPGQDTVVEE 76

Query: 76  GVTVGHNAMLHGCTVGDFSLVGINAVILNGARIGKHCIIGANALIAEGKEIPDGSLVMGS 135
              +GH A+LHGCT+G  +LVG++AVI++GA IG++ I+GA+A +    E+P   L++GS
Sbjct: 77  EGHIGHGAILHGCTIGRNALVGMSAVIIDGASIGENSIVGASAFVKANAEMPANHLIVGS 136

Query: 136 PGKVVRELTEQQKRMLEASAAHYVHNAQRYARDL 169
           P K +R L+EQ+    +     Y    +R  + L
Sbjct: 137 PAKAIRTLSEQELAWKKQGTREYQMLVERCKQTL 170



 Score = 26.9 bits (58), Expect = 2e-04
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 9/58 (15%)

Query: 90  VGDFSLVGINAVILNGARIGKHCIIGANA---------LIAEGKEIPDGSLVMGSPGK 138
           V D S V   AV++    +GK   +G NA         ++ +G  I D  ++ G PG+
Sbjct: 13  VPDESYVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPGQ 70