Pairwise Alignments

Query, 805 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 786 a.a., endopeptidase La from Vibrio cholerae E7946 ATCC 55056

 Score =  530 bits (1366), Expect = e-155
 Identities = 301/768 (39%), Positives = 462/768 (60%), Gaps = 12/768 (1%)

Query: 39  KVYVIPIHNRPFFPAQVLPVIVNEEPWAETLDLVAKSPDHCLALFFMDTPPEDHRHFDTS 98
           ++ V+P+ +   +P  V+P+ V  E   + L+    +    L +       ++ +  D  
Sbjct: 10  EIPVLPLRDVVVYPHMVIPLFVGREKSIQCLEAAMDNNKQVLLVAQKKAETDEPKVADLF 69

Query: 99  ALPQYGTLVKVHHASRENGKLQFVAQGLSRVRIRNWLKHHRPPYLVEVEYPRQPAEPTDE 158
            +    T++++      +G ++ + +G  R +I  + +     +  + +Y   P     E
Sbjct: 70  EVGTVATILQL--LKLPDGTVKVLVEGQQRAKITQFYEEEY--FFADAQYLVTPELDERE 125

Query: 159 VKAYGMALINAIKELLPLNPLYSEELKNYLNRFSPNDPSPLTDFAAALTSATGNQLQEVL 218
            +    + IN  +  + LN     E+   LN    ++ + L D  AA         Q+VL
Sbjct: 126 QEVVVRSAINQFEGFIKLNKKIPPEVLTSLNGI--DEAARLADTIAAHMPLKLVDKQKVL 183

Query: 219 DCVPMLKRMEKVLPMLRKEVEVARLQNEISAEVNRQIGEHQREFFLKEQLKVIQQELGLT 278
           + + + +R+E ++  +  E+++ +++  I   V +Q+ + QRE++L EQ+K IQ+ELG  
Sbjct: 184 ELLDVSERLEFLMGQMESEIDLLQVEKRIRTRVKKQMEKSQREYYLNEQMKAIQKELG-E 242

Query: 279 KDDRSADLEQFEQRLEGKTLPPQARKRIDEEMGKLAILETGSPEYAVTRNYLEWATALPW 338
            DD   + E  ++++E   +P +AR + ++E+ KL ++   S E  V R+Y++W   +PW
Sbjct: 243 MDDAPDEFETLKKKIEESKMPKEARDKAEQELHKLKMMSPMSAEATVVRSYIDWMVNVPW 302

Query: 339 GVYGKDKLDLKHARKVLDQYHSGLDDIKERILEFLAVGAWKGEISGSIVLLVGPPGVGKT 398
               K K DL  A ++L+  H GL+ +KERILE+LAV +   ++ G I+ LVGPPGVGKT
Sbjct: 303 TKRSKVKKDLSKAEEILNADHYGLERVKERILEYLAVQSRINKLKGPILCLVGPPGVGKT 362

Query: 399 SIGKSIAESLGRPFYRFSVGGMRDEAEIKGHRRTYIGAQPGKLVQALKDVEVMNPVIMLD 458
           S+G+SIA + GR + R ++GG+RDEAEI+GHRRTYIG+ PGKL+Q +  V V NP+ +LD
Sbjct: 363 SLGRSIAAATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLD 422

Query: 459 EIDKMGQSYQGDPASALLETLDPEQNVDFLDHYLDLRLDLSKVLFVCTANTLDSIPGPLL 518
           EIDKM    +GDPASALLE LDPEQN  F DHYL++  DLS V+FV T+N++ +IPGPLL
Sbjct: 423 EIDKMSSDMRGDPASALLEVLDPEQNNSFNDHYLEVDYDLSDVMFVATSNSM-NIPGPLL 481

Query: 519 DRMEVIRLSGYITEEKMTIAKRHLWPKQLEKAGVSKTSLSISDSALRLVIDGYAREAGVR 578
           DRMEVIRLSGY  +EK+ IAK HL  KQ+E+ G+  + + I DSA+  +I  Y REAGVR
Sbjct: 482 DRMEVIRLSGYTEDEKLNIAKDHLVSKQVERNGLKPSEIVIEDSAIVGIIRYYTREAGVR 541

Query: 579 QLEKQLGKLVRKAVVKLLENPDAK-LKIGTKDLETALGIPVFRSEQVLAGK--GVITGLA 635
            LE+++ K+ RKAV K+L +   K + +  ++L+  LG+  F   +       G + GLA
Sbjct: 542 GLEREISKICRKAVKKILLDKGVKTVVVNQQNLKEFLGVQRFDYGKAEESNRIGQVNGLA 601

Query: 636 WTSMGGATLPIEATRIHTHNRGFKLTGKLGDVMKESAEIAYSYISSNLKQFGGDPGFFNE 695
           WT +GG  L IE   +    +    TG LGDVM+ES + A + + S  ++ G +P F+ +
Sbjct: 602 WTEVGGDLLTIETQSMPGKGK-LTQTGSLGDVMQESIQAAMTVVRSRAEKLGINPDFYEK 660

Query: 696 AFIHLHVPEGATPKDGPSAGITMASALLSLARDQSAKKGVAMTGELTLTGQVLPIGGVRE 755
             IH+HVPEGATPKDGPSAGI M +AL+S       K  VAMTGE+TL G+VLPIGG++E
Sbjct: 661 KDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVKAEVAMTGEITLRGEVLPIGGLKE 720

Query: 756 KVIAARRQKIFELILPEPNRGDFEELPDYLREGLTVHFAKRFADVAKV 803
           K++AA R  I  +++P+ N  D EE+PD +   L V   +   +V KV
Sbjct: 721 KLLAAHRGGIKTVLIPKDNERDLEEIPDNVIADLQVLPVQWIDEVLKV 768