Pairwise Alignments

Query, 805 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 346 a.a., Holliday junction DNA helicase RuvB from Sinorhizobium meliloti 1021

 Score = 51.2 bits (121), Expect = 9e-11
 Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 50/255 (19%)

Query: 344 DKLDLKHARKVLDQYHSGLDDIKERILEFLAVGAWKGEISGSIVLLVGPPGVGKTSIGKS 403
           + LD     + LD++ +G  + +  +  F+     +GE     VL VGPPG+GKT++ + 
Sbjct: 15  EDLDATMRPQTLDEF-TGQAEARANLKIFIEAARNRGEALDH-VLFVGPPGLGKTTLAQI 72

Query: 404 IAESLGRPFYRFSVGGMRDEAEIKGHRRTYIGAQPGKLVQALKDVEVMNPVIMLDEIDKM 463
           +A+ LG  F R + G               + A+ G L   L ++E  + V+ +DEI ++
Sbjct: 73  MAKELGVNF-RSTSGP--------------VIAKAGDLAALLTNLEERD-VLFIDEIHRL 116

Query: 464 GQSYQGDPASALLETLDPEQNVDFLDHYL-------DLRLDLSKVLFVCTANTLDSIPGP 516
                     A+ E L P      LD  +        +++DL+K   V     L  +  P
Sbjct: 117 N--------PAVEEILYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTP 168

Query: 517 LLDRMEV-IRLSGYITEEKMTIAKRHLWPKQLEKAGVSKTSLSISDSALRLVIDGYAREA 575
           L DR  + +RL+ Y  EE   I +R          G     L ++D   R +    AR A
Sbjct: 169 LRDRFGIPVRLNFYTVEELELIVRR----------GARLMGLGMTDEGAREI----ARRA 214

Query: 576 GVRQLEKQLGKLVRK 590
             R   +  G+L+R+
Sbjct: 215 --RGTPRIAGRLLRR 227