Pairwise Alignments

Query, 805 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 806 a.a., ATP-dependent protease LA protein from Sinorhizobium meliloti 1021

 Score =  585 bits (1509), Expect = e-171
 Identities = 323/762 (42%), Positives = 471/762 (61%), Gaps = 12/762 (1%)

Query: 42  VIPIHNRPFFPAQVLPVIVNEEPWAETLDLVAKSPDHCLALFFMDTPPEDHRHFDTSALP 101
           V+P+ +   FP  ++P+ V  E     L+ V  +    + +  ++   +D    + SA+ 
Sbjct: 16  VLPLRDIVVFPHMIVPLFVGREKSIRALEEVMGTDKQIMLVTQINATDDDP---EPSAIY 72

Query: 102 QYGTLVKVHHASR-ENGKLQFVAQGLSRVRIRNWLKHHRPPYLVEVEYPRQPAEPTDEVK 160
           + GT+  V    +  +G ++ + +G SR  I  +         +    P +P E   E++
Sbjct: 73  KVGTIANVLQLLKLPDGTVKVLVEGRSRAEIERYTPRDDFYEAMAHALP-EPDEDPVEIE 131

Query: 161 AYGMALINAIKELLPLNPLYSEELKNYLNRFSPNDPSPLTDFAAALTSATGNQLQEVLDC 220
           A   ++++  +  + LN   S E+    ++    D S L D  A+  S    + QE+L+ 
Sbjct: 132 ALSRSVVSEFESYVKLNKKISPEVVGVASQIE--DYSKLADTVASHLSIKIVEKQEMLET 189

Query: 221 VPMLKRMEKVLPMLRKEVEVARLQNEISAEVNRQIGEHQREFFLKEQLKVIQQELGLTKD 280
             +  R+EK L  +  E+ V +++  I + V RQ+ + QRE++L EQ+K IQ+ELG ++D
Sbjct: 190 TSVKMRLEKALGFMEGEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDSED 249

Query: 281 DRSADLEQFEQRLEGKTLPPQARKRIDEEMGKLAILETGSPEYAVTRNYLEWATALPWGV 340
            R  ++ + E+R+    L  +AR++ D E+ KL  +   S E  V RNYL+W   LPWG 
Sbjct: 250 GRD-EMAELEERISKTKLSKEAREKADAELKKLRQMSPMSAEATVVRNYLDWLLGLPWGK 308

Query: 341 YGKDKLDLKHARKVLDQYHSGLDDIKERILEFLAVGAWKGEISGSIVLLVGPPGVGKTSI 400
             K K DL HA KVLD  H GLD +KERI+E+LAV A   +I G I+ LVGPPGVGKTS+
Sbjct: 309 KSKIKTDLNHAEKVLDTDHFGLDKVKERIVEYLAVQARSSKIKGPILCLVGPPGVGKTSL 368

Query: 401 GKSIAESLGRPFYRFSVGGMRDEAEIKGHRRTYIGAQPGKLVQALKDVEVMNPVIMLDEI 460
            KSIA++ GR + R ++GG+RDEAEI+GHRRTYIG+ PGK+VQ++K  +  NP+ +LDEI
Sbjct: 369 AKSIAKATGREYIRMALGGVRDEAEIRGHRRTYIGSMPGKVVQSMKKAKKSNPLFLLDEI 428

Query: 461 DKMGQSYQGDPASALLETLDPEQNVDFLDHYLDLRLDLSKVLFVCTANTLDSIPGPLLDR 520
           DKMGQ ++GDP+SALLE LDPEQN  F+DHYL++  DLS V+F+ TANTL +IP PL+DR
Sbjct: 429 DKMGQDFRGDPSSALLEVLDPEQNSTFMDHYLEVEYDLSNVMFITTANTL-NIPPPLMDR 487

Query: 521 MEVIRLSGYITEEKMTIAKRHLWPKQLEKAGVSKTSLSISDSALRLVIDGYAREAGVRQL 580
           MEVIR++GY  +EK  IAKRHL PK +    +     S++D AL  VI  Y REAGVR  
Sbjct: 488 MEVIRIAGYTEDEKREIAKRHLLPKAIRDHALQPNEFSVTDGALMAVIQNYTREAGVRNF 547

Query: 581 EKQLGKLVRKAVVKLLENPDAKLKIGTKDLETALGIPVFRSEQVLAGK--GVITGLAWTS 638
           E++L KL RKAV ++L+    K+++  +++   LG+P FR  +       GV+TGLAWT 
Sbjct: 548 ERELMKLARKAVTEILKGKTKKVEVTAENIHDYLGVPRFRHGEAERDDQVGVVTGLAWTE 607

Query: 639 MGGATLPIEATRIHTHNRGFKLTGKLGDVMKESAEIAYSYISSNLKQFGGDPGFFNEAFI 698
           +GG  L IE   +    R   +TG L DVMKES   A SY+ S    FG +P  F++  I
Sbjct: 608 VGGELLTIEGVMMPGKGR-MTVTGNLRDVMKESISAAASYVRSRAIDFGIEPPLFDKRDI 666

Query: 699 HLHVPEGATPKDGPSAGITMASALLSLARDQSAKKGVAMTGELTLTGQVLPIGGVREKVI 758
           H+HVPEGATPKDGPSAG+ MA+A++S+       K VAMTGE+TL G+VLPIGG++EK++
Sbjct: 667 HVHVPEGATPKDGPSAGVAMATAIVSVMTGIPISKDVAMTGEITLRGRVLPIGGLKEKLL 726

Query: 759 AARRQKIFELILPEPNRGDFEELPDYLREGLTVHFAKRFADV 800
           AA R  I ++++PE N  D  ++PD ++  L +    R  +V
Sbjct: 727 AALRGGIKKVLIPEENAKDLADIPDNVKNSLEIIPVSRMGEV 768