Pairwise Alignments

Query, 805 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 804 a.a., ATP-dependent protease La from Phaeobacter inhibens DSM 17395

 Score =  555 bits (1429), Expect = e-162
 Identities = 314/773 (40%), Positives = 474/773 (61%), Gaps = 30/773 (3%)

Query: 42  VIPIHNRPFFPAQVLPVIVNEEPWAETLDLVAKSPDHCLALFFMDTPPEDHRHFDTSALP 101
           V+P+ +   FP  ++P+ V  E     L+ V       L    +D P ED    D   + 
Sbjct: 11  VLPLRDIVVFPHMIVPLFVGREKSVRALEEVMTDDKQILLSSQID-PAEDDPQSD--GIY 67

Query: 102 QYGTLVKVHHASR-ENGKLQFVAQGLSRVRIRNWLKHH-----RPPYLVEVEYPRQPAEP 155
             G L  V    +  +G ++ + +G +RV+I  +L++      R  YL E+     P + 
Sbjct: 68  NVGVLANVLQLLKLPDGTVKVLVEGHARVKITEYLENDNFFEARAEYLTEM-----PGDV 122

Query: 156 TDEVKAYGMALINAIKELLPLNPLYSEELKNYLNRFSPNDPSPLTDFAAALTSATGNQLQ 215
           T  V+A    + +  +    +     EE  + +   +  +P+ L D  A       +  Q
Sbjct: 123 TT-VEALLRTVGDEFERYAKVRKNIPEEALSAVGETT--EPAKLADLVAGHLGIEVDNKQ 179

Query: 216 EVLDCVPMLKRMEKVLPMLRKEVEVARLQNEISAEVNRQIGEHQREFFLKEQLKVIQQEL 275
           ++L+ + + +R+EKV  +++ E+ V +++ +I   V  Q+ + QRE++L EQ+K IQ+EL
Sbjct: 180 DLLETLSISERLEKVYGLMQGELSVLQVEKKIKTRVKTQMEKTQREYYLNEQMKAIQKEL 239

Query: 276 GLTKDDRSADLEQFEQRLEGKTLPPQARKRIDEEMGKLAILETGSPEYAVTRNYLEWATA 335
           G   +D S ++ + E ++    L  +AR++ + E+ KL  +   S E  V RNYL+W  A
Sbjct: 240 G-DSEDGSNEVAELEAKIAETKLSKEAREKSEAELKKLKNMSPMSAEATVVRNYLDWILA 298

Query: 336 LPWGVYGKDKLDLKHARKVLDQYHSGLDDIKERILEFLAVGAWKGEISGSIVLLVGPPGV 395
           LPWG   + K DL  A+ +LD  H GL+ +KERI+E+LAV     ++ G I+ LVGPPGV
Sbjct: 299 LPWGTKSRVKKDLSRAQDILDADHYGLEKVKERIVEYLAVQQRSAKLKGPILCLVGPPGV 358

Query: 396 GKTSIGKSIAESLGRPFYRFSVGGMRDEAEIKGHRRTYIGAQPGKLVQALKDVEVMNPVI 455
           GKTS+GKS+A++ GR F R S+GG+RDE+EI+GHRRTYIG+ PGK++QALK  +  NP+I
Sbjct: 359 GKTSLGKSVAKATGREFIRISLGGVRDESEIRGHRRTYIGSMPGKIIQALKKAKTTNPLI 418

Query: 456 MLDEIDKMGQSYQGDPASALLETLDPEQNVDFLDHYLDLRLDLSKVLFVCTANTLDSIPG 515
           +LDEIDKMGQ ++GDPASA+LE LDPEQN  F+DHYL++  DLS V+F+ T+N+  ++PG
Sbjct: 419 LLDEIDKMGQDFRGDPASAMLEVLDPEQNATFMDHYLEVEYDLSNVMFLTTSNSY-NMPG 477

Query: 516 PLLDRMEVIRLSGYITEEKMTIAKRHLWPKQLEKAGVSKTSLSISDSALRLVIDGYAREA 575
           PLLDRME+I LSGY  +EK  IAK+HL  KQ++  G+      ++D AL  +I  Y REA
Sbjct: 478 PLLDRMEIIPLSGYTEDEKREIAKQHLISKQVKNHGLKAKEFELTDEALTEIIRTYTREA 537

Query: 576 GVRQLEKQLGKLVRKAVVKLLENPDAKLKIGTKDLETALGIPVFR------SEQVLAGKG 629
           GVR LE+++ K+ RK++ K+++     + +   +L+  LG+  +R       +QV    G
Sbjct: 538 GVRNLEREIAKVARKSLTKIVKKEAETVSVTGDNLDDFLGVAKYRYGLAEKEDQV----G 593

Query: 630 VITGLAWTSMGGATLPIEATRIHTHNRGFKLTGKLGDVMKESAEIAYSYISSNLKQFGGD 689
           V+TGLA+TS+GG  L IEA R+    R  K TGKLGDVMKES E A SY+ S   Q G  
Sbjct: 594 VVTGLAYTSVGGELLSIEALRLPGKGR-MKTTGKLGDVMKESIEAASSYVRSISPQLGVK 652

Query: 690 PGFFNEAFIHLHVPEGATPKDGPSAGITMASALLSLARDQSAKKGVAMTGELTLTGQVLP 749
           P  F++  IH+HVP+GATPKDGPSAG+ M +A++S+      +K +AMTGE+TL G    
Sbjct: 653 PPKFDKIDIHVHVPDGATPKDGPSAGLAMVTAIVSVLTGIPVRKDIAMTGEVTLRGNATA 712

Query: 750 IGGVREKVIAARRQKIFELILPEPNRGDFEELPDYLREGLTVHFAKRFADVAK 802
           IGG++EK++AA R  I  +++P+ N  D  ++PD ++EGLT+      ++V K
Sbjct: 713 IGGLKEKLLAALRGGIKTVLIPQENEKDLPDIPDNVKEGLTIIPVSHVSEVLK 765