Pairwise Alignments

Query, 318 a.a., tRNA (mo5U34)-methyltransferase from Pseudomonas putida KT2440

Subject, 330 a.a., methyltransferase, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  345 bits (884), Expect = 1e-99
 Identities = 172/323 (53%), Positives = 223/323 (69%), Gaps = 6/323 (1%)

Query: 1   MIDLSPLVRRLAGTPLASWSQGLQAQL-DAKLEKGHGDLDRWRGALEALPALQPSEIDLV 59
           MI  S   R++A T L  W + L A L + + +  HG+L +W   L  L    P  +DL 
Sbjct: 1   MISFSSFYRQIADTQLQHWLESLPAILGEWQRQHKHGNLPKWEKVLAKLHYPAPEFLDLK 60

Query: 60  NGLRLD--CDCDDATRAQMRQALMGLSPWRKGPFDLFGVHVDTEWRSDWKWSRVGPHLD- 116
           + + +      D     ++   L  L PWRKGPF + G+H+DTEWRSDWKW RV PHL  
Sbjct: 61  DSVTIGDGLQLDSGQTEKLENLLKILQPWRKGPFHVHGIHIDTEWRSDWKWDRVSPHLSP 120

Query: 117 LQGKRVLDVGCGNGYYQWRMLGAGADMVIGVDPNWLFFCQFQAVQQYLP-ELPAWHLPFA 175
           L  + VLDVGCG+GY+ WRMLGAGA  V+G+DP+ LF CQF+A+++ +  ELP   LP  
Sbjct: 121 LTNRTVLDVGCGSGYHMWRMLGAGAKRVVGIDPSALFLCQFEAIKRLIDTELPVHLLPLG 180

Query: 176 LEDLPANLEGFDTVFSMGVFYHRRSPIEHLLALKDCLVKGGELVLETLVIEGDENQVLVP 235
           +E+LP  L+ FDTVFSMGV YHRRSPI+HLL L+D L  GGELVLETLV++GD++ VLVP
Sbjct: 181 IEELPP-LDAFDTVFSMGVLYHRRSPIDHLLQLRDQLRMGGELVLETLVVDGDKDTVLVP 239

Query: 236 EDRYAQMRNVWYLPSVPALARWLRRAGFSDVRCVDVSVTSVEEQRSTDWMRYQSLSDFLD 295
           +DRY +M NVW+LPS+ AL  WL +  F+DVRCV+V VTS+ EQRST WM+ +SL D+LD
Sbjct: 240 QDRYGKMNNVWFLPSIDALKLWLEKCDFTDVRCVNVDVTSLAEQRSTPWMQNESLVDYLD 299

Query: 296 PNDHSKTVEGLPAPRRATLLARK 318
           P D + TVEG PAP+RAT +A K
Sbjct: 300 PKDVNLTVEGYPAPKRATFIAVK 322