Pairwise Alignments

Query, 318 a.a., tRNA (mo5U34)-methyltransferase from Pseudomonas putida KT2440

Subject, 330 a.a., putative methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  339 bits (870), Expect = 5e-98
 Identities = 174/324 (53%), Positives = 220/324 (67%), Gaps = 8/324 (2%)

Query: 1   MIDLSPLVRRLAGTPLASWSQGLQAQLDA-KLEKGHGDLDRWRGALEALPALQPSEIDLV 59
           MI  S   +++A + L  W + L A L   + E  HG+L +W   L  L    P  ID  
Sbjct: 1   MISFSSFYQQIADSNLQHWLEELPAILGQWQREHKHGNLPKWEKVLNKLHYPAPDRIDFT 60

Query: 60  NGLRLDCDCDDATRAQ---MRQALMGLSPWRKGPFDLFGVHVDTEWRSDWKWSRVGPHLD 116
             + +    D  ++ Q   ++  L    PWRKGPFDL G+H+DTEWRSDWKW RV PH+ 
Sbjct: 61  TRVEVGSG-DQLSKGQQEKLKNLLKLFCPWRKGPFDLHGIHIDTEWRSDWKWERVQPHIS 119

Query: 117 -LQGKRVLDVGCGNGYYQWRMLGAGADMVIGVDPNWLFFCQFQAVQQYLP-ELPAWHLPF 174
            L+ + VLDVGCG+GY+ WRMLG GA  V+G+DP+ LF CQF+AV++    + P   LP 
Sbjct: 120 PLKNRTVLDVGCGSGYHMWRMLGDGAKRVVGIDPSPLFLCQFEAVKRLAGNDHPVHLLPL 179

Query: 175 ALEDLPANLEGFDTVFSMGVFYHRRSPIEHLLALKDCLVKGGELVLETLVIEGDENQVLV 234
            +E LP  L+ FDTVFSMGV YHRRSPI+HLL L+D L  GGELVLETLV++GDEN VLV
Sbjct: 180 GIEQLPP-LDAFDTVFSMGVLYHRRSPIDHLLQLRDQLRTGGELVLETLVVDGDENTVLV 238

Query: 235 PEDRYAQMRNVWYLPSVPALARWLRRAGFSDVRCVDVSVTSVEEQRSTDWMRYQSLSDFL 294
           P +RY +M NVW+LPS  AL  WL++A F DVRCVD+ VTS+ EQRST+WM  +SL D+L
Sbjct: 239 PGERYGKMNNVWFLPSAKALEAWLKKADFVDVRCVDIDVTSLAEQRSTEWMPNESLVDYL 298

Query: 295 DPNDHSKTVEGLPAPRRATLLARK 318
           DPND S TVEG PAP+RAT +A K
Sbjct: 299 DPNDVSLTVEGYPAPKRATFIAVK 322