Pairwise Alignments

Query, 193 a.a., RNA polymerase sigma E factor from Pseudomonas putida KT2440

Subject, 193 a.a., RNA polymerase sigma factor RpoE from Pseudomonas stutzeri RCH2

 Score =  360 bits (924), Expect = e-105
 Identities = 179/193 (92%), Positives = 188/193 (97%)

Query: 1   MLTQEEDQQLVERVQRGDRRAFDLLVLKYQHKILGLIVRFVHDTHEAQDVAQEAFIKAYR 60
           MLTQE+DQQLVERVQRGD+RAFDLLV+KYQHKILGLIVRFVHD+HEAQDVAQEAFIKAYR
Sbjct: 1   MLTQEQDQQLVERVQRGDKRAFDLLVMKYQHKILGLIVRFVHDSHEAQDVAQEAFIKAYR 60

Query: 61  ALGNFRGDSAFYTWLYRIAINTAKNYLVSRGRRPPDSDVSSEDAEFYDGDHGLKDLESPE 120
           AL NFRGDSAFYTWLYRIAINTAKN+LV+RGRRPPDSDVSSEDAEFY+GDH LKD+ESPE
Sbjct: 61  ALANFRGDSAFYTWLYRIAINTAKNHLVARGRRPPDSDVSSEDAEFYEGDHALKDIESPE 120

Query: 121 RSLLRDEIEGTVHRTIQQLPEDLRTALTLREFDGLSYEDIASVMQCPVGTVRSRIFRARE 180
           RSLLRDEIE TVHRTIQ LPEDLRTALTLREFDGLSYEDIASVMQCPVGTVRSRIFRARE
Sbjct: 121 RSLLRDEIEDTVHRTIQLLPEDLRTALTLREFDGLSYEDIASVMQCPVGTVRSRIFRARE 180

Query: 181 AIDKALQPLLQET 193
           AIDKALQPLL E+
Sbjct: 181 AIDKALQPLLHES 193