Pairwise Alignments

Query, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

Subject, 419 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

 Score =  369 bits (946), Expect = e-106
 Identities = 207/415 (49%), Positives = 261/415 (62%), Gaps = 7/415 (1%)

Query: 20  SAIASALALAGVAPMSQAA---FFEDSTATFETRNMYFNRDFRDGTS-AQQSKRDEWAQG 75
           S +A  +A A   P  QAA   F +DSTAT + RN YF+RDF D    +QQSK +EW QG
Sbjct: 7   SRLALTIAAASAFPAVQAAEGGFIDDSTATLQARNYYFSRDFSDIVGKSQQSKAEEWGQG 66

Query: 76  FILNFESGYTDGTVGFGLDALGMLGIKLDSSPDRTDSGLLPTHDDGKAADEYSKLGLTGK 135
           FILNF+SGYT GTVG G+DA+G+LG+KLDSS DR  +GLLP  DDG+AAD+YS+LG   K
Sbjct: 67  FILNFKSGYTQGTVGVGIDAIGLLGLKLDSSRDRVGTGLLPVGDDGRAADDYSRLGAALK 126

Query: 136 VKISQTELKIGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRIDKAKDRND 195
           V++S TELKIG L P LP L  +D R+LP T++G  + S EI GLT  GG +     RN+
Sbjct: 127 VRLSNTELKIGELQPNLPVLTFSDIRLLPPTYQGASIVSNEIDGLTLQGGHLRSTSLRNE 186

Query: 196 TNWEDLALNNKNGRFGGTFSADNLALGGLDYQFTDRITG-SYHFAQLDDIYRQHFIGMVA 254
               D  +    GR   T  +D     G DY F  + T  S  +AQL+DIY Q FIG+  
Sbjct: 187 AG--DDRMRAMLGRTPQTGLSDAFNYAGGDYAFNAKRTSLSAWYAQLEDIYNQRFIGLKH 244

Query: 255 TQPWGPGTLGADLRLAMSDDAGAAKAGNIDNTTVNGMLSYALGGHKVSAAWQQLSGESAF 314
           ++P G  TLGA+L    S + G+  AG IDN     +LS   GGH     +Q + G++AF
Sbjct: 245 SEPLGSWTLGANLGFYDSQEDGSKLAGTIDNQAFYSLLSAKRGGHTFYVGYQAIYGDNAF 304

Query: 315 PYVDGADPYLVNFVQINDFAGADERSWQARYDYNFAALGVPGLTFMTRYISGDNVSRAAG 374
           P V      L N V   +FA  DERSWQARYDY+FAA+GVPGL    RYI+ DNV    G
Sbjct: 305 PRVFANVTPLGNEVPTYEFAEKDERSWQARYDYDFAAVGVPGLVATVRYITSDNVDTDNG 364

Query: 375 GEGKEWERNTELKYVVQSGPLKNVAVRLRNATFRSNFARDADEVRLLVSYSVALW 429
            EG   ER+ +L Y VQSGPLKNV VR+RN   RSN+  D DE RL++SY++ L+
Sbjct: 365 FEGNARERDLDLGYTVQSGPLKNVGVRIRNVAARSNYRSDIDENRLILSYTLTLF 419