Pairwise Alignments

Query, 493 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 625 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  127 bits (320), Expect = 9e-34
 Identities = 68/161 (42%), Positives = 105/161 (65%), Gaps = 3/161 (1%)

Query: 329 ATLDSLTGLYNRRSFDLLAAQALREARRDSSPLVALLIDLDHFKALNDNHGHLAGDEVLR 388
           +T+DSLTG+ NR +FD       R +RR  +P+  L++D+D FK++ND  GHLAGD+ L+
Sbjct: 454 STIDSLTGVKNRSAFDKRLLAESRISRRQETPIALLMLDIDRFKSINDQFGHLAGDQALK 513

Query: 389 QFANVLQGSL-RQSDILCRWGGEEFIVLLREAEGRQAIEVAEKIRRRTEQLTFSYDNQPL 447
             A  LQ  L R +D++ R+GGEEF ++L       A++VAE IR     +  +++ +P+
Sbjct: 514 LIAQTLQQHLKRPTDLVSRFGGEEFAIILPNTTADGALQVAESIRDTVSCIGLTWEGKPI 573

Query: 448 RLTTSIGLSSLQPGDTLHA--LLTRADRALYRAKQAGRNRV 486
            LT SIG+S+    +  H+  LL +AD+ALY+AK +GRN+V
Sbjct: 574 PLTVSIGVSADVIMNEQHSTELLEQADKALYQAKNSGRNQV 614